DRSC/TRiP Functional Genomics Resources

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Protein Alignment row and si:ch211-202h22.10

DIOPT Version :9

Sequence 1:NP_001260992.1 Gene:row / 36685 FlyBaseID:FBgn0033998 Length:1301 Species:Drosophila melanogaster
Sequence 2:XP_017212100.2 Gene:si:ch211-202h22.10 / 100002322 ZFINID:ZDB-GENE-110914-121 Length:519 Species:Danio rerio


Alignment Length:441 Identity:94/441 - (21%)
Similarity:147/441 - (33%) Gaps:134/441 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   739 KTVECPICLNGDSFDSNEKLQTHLVSHISPEGKQHQFQCLFCLEKHPTESVLAKHNQIMHPTETK 803
            |...||.|  |..|.:.:.|::|:..||    ::..|.|..| |...|.....|.:.::|     
Zfish   148 KPFACPQC--GKGFTAKQCLKSHMSVHI----EEKPFNCSLC-EMSFTHQQSLKRHMLIH----- 200

  Fly   804 TEGSPSYYCLICQQRHNSLHLLTAHLQKVHSTLELPYWCHSCGYRSSSHRDLVRHFYDDHKHQNF 868
             .|...|.|..|.:..:....|.:|: ::| |.|.|:.|..||...:..::|..|. ..|.....
Zfish   201 -VGEKPYVCRQCGKSFSVKQSLESHI-RIH-TGEKPFACAECGKGFAVKQNLESHM-RVHTGVKP 261

  Fly   869 LQCPYCLDIFYFSKLGVVNQLRIEHYFMHLDEHINKRDPSLRCQKCSLSFLEKGDLKQHAVQH-- 931
            ..||.|      .|...|.|....|..:|..|.      ...|..|..:|..|..|:.|...|  
Zfish   262 FSCPQC------GKRFTVKQSLESHMTIHTGER------PFTCSMCDKTFTVKHKLEYHMRNHTG 314

  Fly   932 ---------------------HVSMTKTNRPV-------RLLLNNSMLIPPPKIRTHHREQPPFS 968
                                 ||.:....:|.       |..:..|:   ...:|.|:|.:|...
Zfish   315 EKPYICPQCGNSYALRNHLERHVRIHTGEKPFSCSKCAKRFTMKQSL---KSHMRVHNRTKPYIC 376

  Fly   969 TY--KRPVFFAFLEGK----------TCAECNTDFA---SEETH---YTGWLHCVKCNYQTCCER 1015
            :.  ||......||..          ||.||...:.   |.|||   :|| ..|..|:       
Zfish   377 SQCGKRFTVKQSLESHMSLHTGEKPFTCTECGKSYTLRQSLETHMRVHTG-DKCFSCS------- 433

  Fly  1016 AQFRHGVECNGNFVDAMEVNMPQEMHCICGFATGN--------GNKMAQHLANCGLSTCYPSLEA 1072
                   :|..:|.....:::...:|      ||.        |.:..||               
Zfish   434 -------DCGRSFTVKQNLHVHMRVH------TGERPYTCAQCGKRFTQH--------------- 470

  Fly  1073 ASENAVKRNMLDMLGLVRRDGETSGEGADISETA-DDVADQSSDMLPPQED 1122
               ..:.|:|     .:..:.:|:.:.::  ||. |:.||.|||:....|:
Zfish   471 ---GQLNRHM-----RIHTEQKTTRDRSE--ETLNDETADNSSDIQHQSEE 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rowNP_001260992.1 C2H2 Zn finger 777..798 CDD:275368 5/20 (25%)
C2H2 Zn finger 812..833 CDD:275368 4/20 (20%)
C2H2 Zn finger 842..858 CDD:275368 4/15 (27%)
si:ch211-202h22.10XP_017212100.2 C2H2 Zn finger 12..32 CDD:275368
COG5048 36..439 CDD:227381 75/336 (22%)
C2H2 Zn finger 40..60 CDD:275368
C2H2 Zn finger 68..88 CDD:275368
C2H2 Zn finger 96..116 CDD:275368
C2H2 Zn finger 124..144 CDD:275368
C2H2 Zn finger 152..172 CDD:275368 7/21 (33%)
C2H2 Zn finger 180..200 CDD:275368 5/20 (25%)
C2H2 Zn finger 208..228 CDD:275368 4/20 (20%)
C2H2 Zn finger 236..256 CDD:275368 5/20 (25%)
C2H2 Zn finger 264..284 CDD:275368 7/25 (28%)
C2H2 Zn finger 292..312 CDD:275368 6/19 (32%)
C2H2 Zn finger 320..340 CDD:275368 2/19 (11%)
C2H2 Zn finger 348..368 CDD:275368 3/22 (14%)
C2H2 Zn finger 376..396 CDD:275368 4/19 (21%)
C2H2 Zn finger 404..424 CDD:275368 7/19 (37%)
C2H2 Zn finger 432..452 CDD:275368 3/33 (9%)
zf-H2C2_2 448..469 CDD:316026 4/26 (15%)
C2H2 Zn finger 460..480 CDD:275368 5/42 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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