DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11807 and AT1G78230

DIOPT Version :9

Sequence 1:NP_001260990.1 Gene:CG11807 / 36683 FlyBaseID:FBgn0033996 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_177947.3 Gene:AT1G78230 / 844159 AraportID:AT1G78230 Length:681 Species:Arabidopsis thaliana


Alignment Length:311 Identity:82/311 - (26%)
Similarity:140/311 - (45%) Gaps:63/311 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 KDNASYAQDYNTVDVPIDRSNIIPNR---LSFNLNAFRNLKTLK--FSALSTENIV------DIE 246
            :::.:|..|:..     ..||:.|:.   ::|:..: .::|.:.  ...|..|.:|      |:.
plant   332 EESTNYCADFTN-----QSSNLWPHHNQWVAFSAES-SSMKRVDEWVRGLDVETVVPVNEDKDVL 390

  Fly   247 LLKPTLQTICVHNTTIQNINQVLLCDN-----LHKHCDVPSLLPETILASPSGSG----PSTSNG 302
            .:.||..     ||....:..|:...|     :|.:..:.||...:.:|..|..|    ||.|:.
plant   391 AIFPTSP-----NTERSPLGNVVQSGNVSEAIVHANSLIQSLSKSSSVAHISSIGLKAIPSISHF 450

  Fly   303 SALVSADAWQEITELDLTGNLLTQIDGSVRTAPK-LRRLILDQNRIRTVQNLAELPQLQLLSLSG 366
            ::|.|         :||:.|.:.||  :..:.|| |..|.|.:|:|..::.|.:|.:|::|.||.
plant   451 TSLKS---------IDLSNNFIVQI--TPASLPKGLHALNLSKNKISVIEGLRDLTRLRVLDLSY 504

  Fly   367 NLIAECVDWHLTMGNLV-TLKLAQNKIKTLSGLRKLLSLVNLDLSSNQIEELDEVNH-VANLPLL 429
            |.|:. :...|:...|: .|.||.|||..:.||.:||.|:.||||.|:|.....:.. |||...|
plant   505 NRISR-IGQGLSNCTLIKELYLAGNKISNVEGLHRLLKLIVLDLSFNKIATTKAIGQLVANYNSL 568

  Fly   430 ETLRLTGNPLAGSVD----------------YRSRVLARFHERAAEISLDN 464
            ..|.:.|||:..:|.                |.::.|.: .:||.|:..|:
plant   569 VALNILGNPIQNNVGEDQLRKTVSSLLPKLVYHNKQLIK-PQRAREVLKDS 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11807NP_001260990.1 PX_IRAS 8..126 CDD:132785
leucine-rich repeat 315..336 CDD:275380 5/20 (25%)
LRR_8 335..414 CDD:290566 33/80 (41%)
leucine-rich repeat 337..381 CDD:275380 14/43 (33%)
LRR_4 381..422 CDD:289563 18/41 (44%)
leucine-rich repeat 382..403 CDD:275380 10/21 (48%)
leucine-rich repeat 404..428 CDD:275380 10/24 (42%)
AT1G78230NP_177947.3 LRR_RI <430..>595 CDD:238064 56/176 (32%)
LRR_8 451..507 CDD:290566 21/66 (32%)
leucine-rich repeat 453..474 CDD:275378 8/31 (26%)
leucine-rich repeat 475..496 CDD:275378 7/20 (35%)
leucine-rich repeat 497..519 CDD:275378 7/22 (32%)
leucine-rich repeat 520..541 CDD:275378 9/20 (45%)
leucine-rich repeat 542..554 CDD:275378 7/11 (64%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.