DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11807 and AT4G03260

DIOPT Version :10

Sequence 1:NP_611017.1 Gene:CG11807 / 36683 FlyBaseID:FBgn0033996 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_192235.3 Gene:AT4G03260 / 828003 AraportID:AT4G03260 Length:677 Species:Arabidopsis thaliana


Alignment Length:158 Identity:48/158 - (30%)
Similarity:79/158 - (50%) Gaps:5/158 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 LASPSGSGPSTSNGSALVS-ADAWQEITELDLTGNLLTQIDGSVRTAPK-LRRLILDQNRIRTVQ 351
            |::.:.:....|:|..::. ..|:..:..|:|:||.:.:|  :....|: |..|.|.:|.|..::
plant   395 LSASATTAQLVSHGLVVIPFLSAFVGLRVLNLSGNAIVRI--TAGALPRGLHALNLSKNSISVIE 457

  Fly   352 NLAELPQLQLLSLSGNLIAECVDWHLTMGNLVTLKLAQNKIKTLSGLRKLLSLVNLDLSSNQIEE 416
            .|.||.:|::|.||.|.|........:..:|..|.||.|||..:.||.:||.|..|||..|:...
plant   458 GLRELTRLRVLDLSYNRILRLGHGLASCSSLKELYLAGNKISEIEGLHRLLKLTVLDLRFNKFST 522

  Fly   417 LDEVNHV-ANLPLLETLRLTGNPLAGSV 443
            ...:..: ||...|:.:.|.|||...:|
plant   523 TKCLGQLAANYSSLQAISLEGNPAQKNV 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11807NP_611017.1 PX_IRAS 8..126 CDD:132785
PPP1R42 <314..451 CDD:455733 44/132 (33%)
leucine-rich repeat 315..336 CDD:275380 5/20 (25%)
leucine-rich repeat 337..381 CDD:275380 14/43 (33%)
leucine-rich repeat 382..403 CDD:275380 10/20 (50%)
leucine-rich repeat 404..428 CDD:275380 7/24 (29%)
AT4G03260NP_192235.3 leucine-rich repeat 400..420 CDD:275380 3/19 (16%)
LRR <413..597 CDD:443914 45/140 (32%)
leucine-rich repeat 421..442 CDD:275378 6/22 (27%)
leucine-rich repeat 443..464 CDD:275378 8/20 (40%)
leucine-rich repeat 465..487 CDD:275378 6/21 (29%)
leucine-rich repeat 488..509 CDD:275378 10/20 (50%)
leucine-rich repeat 510..522 CDD:275378 5/11 (45%)
Blue background indicates that the domain is not in the aligned region.

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