DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11807 and nisch

DIOPT Version :9

Sequence 1:NP_001260990.1 Gene:CG11807 / 36683 FlyBaseID:FBgn0033996 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_002666276.2 Gene:nisch / 553087 ZFINID:ZDB-GENE-050208-570 Length:1406 Species:Danio rerio


Alignment Length:473 Identity:165/473 - (34%)
Similarity:257/473 - (54%) Gaps:48/473 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 TYYDIKVRVGKVEWLVERRYRDFANLHEKLVGEISISKKLLPPKKLVGNKQPSFLEQRREQLEIY 92
            |.|.|:|:||...|.|:.||.||..|||||..|..|.|.||||||::|....|.:|:|:::||:|
Zfish    27 TVYIIEVKVGDHSWSVKHRYSDFHELHEKLTVEKKIDKHLLPPKKIIGKNSKSLVEKRQKELEVY 91

  Fly    93 LQELLIYFRTELPRALAEFLDFNKYDIIYLLQDLAKLFNESGDALLSSKKEYNLSALEVYAISER 157
            ||.||..|....|:.|:.||.|:.|:|..:...||:....:|:.||::.:.:.|..|::||::::
Zfish    92 LQTLLSRFPATTPKVLSNFLLFHLYEINGIAAALAEELFHNGEQLLAAGEVFLLKPLQLYAVTQQ 156

  Fly   158 LSLPCPPSLDRGGKYDFSHVLDFCTQLVALVVTPVKDNASYAQDYNTVDVPIDRSNIIPNRLSFN 222
            |.|..|...:...|.|..|:|||..:|..|.:...|..             :..|||....|.|:
Zfish   157 LRLAKPTCANGDAKADLGHILDFTCRLKYLKIPGKKST-------------VGTSNIEEQSLLFD 208

  Fly   223 LNAFRNLKTLKFSALSTENIVDIELLKPTLQTICVHNTTIQNINQVLL----------CDNLHKH 277
            |:.|:.|..::.|......|..:..|||||.|:.:| .:.:::.::|:          .:.:...
Zfish   209 LSIFKALLQIEISDCDAGQIRGLPSLKPTLATLSIH-LSAKSMKEILVPEASEFAQWEPEGVDTD 272

  Fly   278 CDVPSLLPETILASPSGSGPSTSNGSALVSADAWQEITELDLTGNLLTQIDGSVRTAPKLRRLIL 342
            |.|.:::|                        .|:.:|.||::.|.:..||.||:..|::..|.|
Zfish   273 CPVTAIIP------------------------TWKMLTTLDMSRNYIRCIDESVKLIPEVEFLDL 313

  Fly   343 DQNRIRTVQNLAELPQLQLLSLSGNLIAECVDWHLTMGNLVTLKLAQNKIKTLSGLRKLLSLVNL 407
            ..|.:..|:||..|..|..|.||.|.:......|..:||:.||.|::|:::|||||.||.|||||
Zfish   314 SHNELSLVENLEHLYNLVHLDLSFNKLTVLEGVHTKLGNIKTLNLSENQLETLSGLSKLYSLVNL 378

  Fly   408 DLSSNQIEELDEVNHVANLPLLETLRLTGNPLAGSVDYRSRVLARFHERAAEISLDNEPGNQQEL 472
            |||||::.:|||:.|:..||.||.|.|..||:....|||::|||:|.:||:|:.||.....::||
Zfish   379 DLSSNKLTQLDEIKHIGLLPCLEKLNLANNPMCIIPDYRTKVLAQFCDRASEVCLDATITTEKEL 443

  Fly   473 DTALVLSALLQSKQRQQQ 490
            ||..||.|:.::|:.:.:
Zfish   444 DTVEVLKAIQKAKEAKDR 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11807NP_001260990.1 PX_IRAS 8..126 CDD:132785 45/97 (46%)
leucine-rich repeat 315..336 CDD:275380 8/20 (40%)
LRR_8 335..414 CDD:290566 37/78 (47%)
leucine-rich repeat 337..381 CDD:275380 13/43 (30%)
LRR_4 381..422 CDD:289563 25/40 (63%)
leucine-rich repeat 382..403 CDD:275380 11/20 (55%)
leucine-rich repeat 404..428 CDD:275380 14/23 (61%)
nischXP_002666276.2 PX_IRAS 10..125 CDD:132785 45/97 (46%)
LRR_RI <285..408 CDD:238064 55/122 (45%)
LRR_8 285..340 CDD:290566 21/54 (39%)
leucine-rich repeat 285..307 CDD:275380 8/21 (38%)
leucine-rich repeat 308..329 CDD:275380 7/20 (35%)
LRR_8 329..385 CDD:290566 29/55 (53%)
leucine-rich repeat 330..352 CDD:275380 6/21 (29%)
LRR_4 352..393 CDD:289563 25/40 (63%)
leucine-rich repeat 353..374 CDD:275380 11/20 (55%)
leucine-rich repeat 375..399 CDD:275380 14/23 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596250
Domainoid 1 1.000 86 1.000 Domainoid score I8083
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006271
OrthoInspector 1 1.000 - - oto40218
orthoMCL 1 0.900 - - OOG6_107027
Panther 1 1.100 - - LDO PTHR15454
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3315
SonicParanoid 1 1.000 - - X4560
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.870

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