DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11807 and Snx22

DIOPT Version :9

Sequence 1:NP_001260990.1 Gene:CG11807 / 36683 FlyBaseID:FBgn0033996 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001100302.2 Gene:Snx22 / 300796 RGDID:1305042 Length:194 Species:Rattus norvegicus


Alignment Length:95 Identity:32/95 - (33%)
Similarity:49/95 - (51%) Gaps:10/95 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ESSSGGVTYYDIKVRVGKVEWLVERRYRDFANLHEKLVGEISISKKL-LP--PKKLVGNKQPSFL 82
            :|...|...:.::|........|.|||.:|..||::      |.|:. :|  |.|.:.|.:...|
  Rat    18 QSPEKGHMVFQVEVLYSGRRHTVPRRYSEFHALHKR------IKKRYKVPDFPSKRLPNWRTRGL 76

  Fly    83 EQRREQLEIYLQELLIYFRTELPRALAEFL 112
            ||||:.||.|:|.:| |...::|:.|.|||
  Rat    77 EQRRQGLETYIQGVL-YLNQDVPKELLEFL 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11807NP_001260990.1 PX_IRAS 8..126 CDD:132785 32/95 (34%)
leucine-rich repeat 315..336 CDD:275380
LRR_8 335..414 CDD:290566
leucine-rich repeat 337..381 CDD:275380
LRR_4 381..422 CDD:289563
leucine-rich repeat 382..403 CDD:275380
leucine-rich repeat 404..428 CDD:275380
Snx22NP_001100302.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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