DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11807 and SNX20

DIOPT Version :9

Sequence 1:NP_001260990.1 Gene:CG11807 / 36683 FlyBaseID:FBgn0033996 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_878274.1 Gene:SNX20 / 124460 HGNCID:30390 Length:316 Species:Homo sapiens


Alignment Length:241 Identity:56/241 - (23%)
Similarity:88/241 - (36%) Gaps:75/241 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VPKFSNESSSGGVTYYDIKVRVGKVE---WLVERRYRDFANLHEKLVGEI--SISKKLLPPKKLV 74
            |.||        |.|..|.::.|..:   .::||||.|||.|.:.|:...  .|.....|.|.|.
Human    90 VSKF--------VVYQIIVIQTGSFDNNKAVLERRYSDFAKLQKALLKTFREEIEDVEFPRKHLT 146

  Fly    75 GNKQPSFLEQRREQLEIYLQELLIYFRTELPRALAEFLDFNKYDIIYLLQDLAKLFNESGDALLS 139
            ||.....:.:||..|:.||.   :.:.....|...|||||      ....:|.:.|.    .|.:
Human   147 GNFAEEMICERRRALQEYLG---LLYAIRCVRRSREFLDF------LTRPELREAFG----CLRA 198

  Fly   140 SKKEYNLS-ALEVYAISERLSLPCPPS--------------LDR-------------------GG 170
            .:....|. .|.|..:.|:|:..||.:              |||                   |.
Human   199 GQYPRALELLLRVLPLQEKLTAHCPAAAVPALCAVLLCHRDLDRPAEAFAAGERALQRLQAREGH 263

  Fly   171 KYDFSHVLDFCTQLVALVVTPVKDNASYA--QDYNTVDVPIDRSNI 214
            :| ::.:||...:|            :||  :|:.|:...::.|.:
Human   264 RY-YAPLLDAMVRL------------AYALGKDFVTLQERLEESQL 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11807NP_001260990.1 PX_IRAS 8..126 CDD:132785 33/115 (29%)
leucine-rich repeat 315..336 CDD:275380
LRR_8 335..414 CDD:290566
leucine-rich repeat 337..381 CDD:275380
LRR_4 381..422 CDD:289563
leucine-rich repeat 382..403 CDD:275380
leucine-rich repeat 404..428 CDD:275380
SNX20NP_878274.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..54
PX_SNX20 76..189 CDD:132833 33/115 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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