DRSC/TRiP Functional Genomics Resources

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Protein Alignment igl and Spa17

DIOPT Version :10

Sequence 1:NP_477060.1 Gene:igl / 36681 FlyBaseID:FBgn0013467 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_445934.1 Gene:Spa17 / 85244 RGDID:620154 Length:148 Species:Rattus norvegicus


Alignment Length:117 Identity:34/117 - (29%)
Similarity:50/117 - (42%) Gaps:23/117 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 DKAAITEFNDDEDEAKAATKIQAVFRGH--KVRETMKKSETKTATNNGSAAGAAPSAAAAEAAAS 148
            :|...|.|:..|..||...:.   :..|  |..|..:|.|.:.|..:|        .........
  Rat    48 EKREKTSFDPAEWGAKVEDRF---YNNHAFKDPEQAEKCEQEIAKASG--------REETPVTPF 101

  Fly   149 AEPTKAELEAEFDPNDKDLCHAALKIQSTFRGHLARKLVNK-DAPEDEDIQE 199
            .|.|:.|.|.|         .||:||||.||||:||:.|.| .:.:.|:::|
  Rat   102 EESTEEEREQE---------EAAVKIQSAFRGHVAREEVKKMKSDKSENVKE 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iglNP_477060.1 Adgb_C_mid-like <74..>129 CDD:412094 12/44 (27%)
IQCD 99..>121 CDD:467745 5/23 (22%)
IQ motif 104..122 CDD:412094 3/19 (16%)
Adgb_C_mid-like <169..>209 CDD:412094 16/32 (50%)
IQ 169..185 CDD:197470 11/15 (73%)
IQ motif 172..189 CDD:412094 11/16 (69%)
globin helix A 196..209 CDD:412094 1/4 (25%)
IQCD 216..>238 CDD:467745
Spa17NP_445934.1 DD_CABYR_SP17 9..50 CDD:438521 0/1 (0%)
Adgb_C_mid-like <74..>143 CDD:412094 26/85 (31%)
IQCD <114..136 CDD:467745 14/21 (67%)
IQ motif 116..134 CDD:412094 11/17 (65%)
Blue background indicates that the domain is not in the aligned region.

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