DRSC/TRiP Functional Genomics Resources

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Protein Alignment igl and Pcp4l1

DIOPT Version :10

Sequence 1:NP_477060.1 Gene:igl / 36681 FlyBaseID:FBgn0013467 Length:240 Species:Drosophila melanogaster
Sequence 2:XP_017454425.1 Gene:Pcp4l1 / 685448 RGDID:1593809 Length:85 Species:Rattus norvegicus


Alignment Length:17 Identity:5/17 - (29%)
Similarity:8/17 - (47%) Gaps:0/17 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PLEGESSKSSASNHTNH 47
            |.||...:::.|....|
  Rat    38 PEEGVDERNTRSLTPKH 54

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iglNP_477060.1 Adgb_C_mid-like <74..>129 CDD:412094
IQCD 99..>121 CDD:467745
IQ motif 104..122 CDD:412094
Adgb_C_mid-like <169..>209 CDD:412094
IQ 169..185 CDD:197470
IQ motif 172..189 CDD:412094
globin helix A 196..209 CDD:412094
IQCD 216..>238 CDD:467745
Pcp4l1XP_017454425.1 None
Blue background indicates that the domain is not in the aligned region.

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