DRSC/TRiP Functional Genomics Resources

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Protein Alignment igl and spa17

DIOPT Version :9

Sequence 1:NP_477060.1 Gene:igl / 36681 FlyBaseID:FBgn0013467 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_001006758.1 Gene:spa17 / 448437 XenbaseID:XB-GENE-958602 Length:495 Species:Xenopus tropicalis


Alignment Length:334 Identity:78/334 - (23%)
Similarity:111/334 - (33%) Gaps:104/334 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GCNTSQELKTKDGAAMDAVSNGEP---------EPSAPPLEGESSK--SSASNHTNH-------- 47
            |.|...::|....:.:|.....||         |.....:|.|..:  |.|.|:..|        
 Frog   139 GYNVRHKVKIHQESFVDNYMKPEPEHEDTDQAKETKCDLMENEDCEFNSKADNNEMHDEKVEIPD 203

  Fly    48 -------AKS----SSIISNGEA-KAANGGGAVGG----GSGKSEATNG--IDRPCDKAAITEFN 94
                   .||    .:|..:||. :..|..|..|.    .|.|.|.:.|  :||......::|..
 Frog   204 SISADELVKSEEFQEAITDSGEKDEEINLVGREGKEREFNSLKPEGSGGQEVDRQEQFTEVSELE 268

  Fly    95 ----DD---EDEAKAATKIQAVFRGHKVRE-----TMKKSETKTATN------------------ 129
                ||   .|..|.||..:...|.:.|.|     |.|:.||....|                  
 Frog   269 IKEPDDSMQNDTIKDATSEEKEERINDVVEHYMITTGKRGETTQDDNLSDLTDQSATYEIQNTEV 333

  Fly   130 NGSAAGAAPSAAAAEA------------AASAEPT-------------------KAELEAEFDPN 163
            |.:.....|....::.            .:|.||.                   .:::|......
 Frog   334 NTTNESILPDLLYSQTNELESSSNQLLDTSSKEPNPLADSNIDILNEQSSVHIDTSDMENLSGKP 398

  Fly   164 DKDLCHAALKI--QSTFRGHLARKLVNKDAPEDEDIQEITKKVAEELDIDLTDPELNKAATKIQA 226
            |.:|.|..::.  ..|...|..|.  |.::|::.  :...|...|.|||.|.||:.|.||.||||
 Frog   399 DPELLHNIMESLGNQTVLEHEDRS--NLESPKEN--ESFRKPQEEALDIPLDDPDANAAAAKIQA 459

  Fly   227 SFRGHKTRK 235
            .||||.|||
 Frog   460 GFRGHMTRK 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iglNP_477060.1 Adgb_C_mid-like <74..>129 CDD:412094 19/68 (28%)
IQ motif 104..122 CDD:412094 6/22 (27%)
Adgb_C_mid-like <169..>209 CDD:412094 8/41 (20%)
IQ 169..185 CDD:197470 3/17 (18%)
IQ motif 172..189 CDD:412094 3/18 (17%)
globin helix A 196..209 CDD:412094 2/12 (17%)
IQ 216..235 CDD:197470 12/18 (67%)
spa17NP_001006758.1 DD_CABYR_SP17 12..50 CDD:213047
MDN1 <159..488 CDD:331582 74/314 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10699
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8834
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.040

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