DRSC/TRiP Functional Genomics Resources

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Protein Alignment igl and Gap43

DIOPT Version :9

Sequence 1:NP_477060.1 Gene:igl / 36681 FlyBaseID:FBgn0013467 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_032109.1 Gene:Gap43 / 14432 MGIID:95639 Length:227 Species:Mus musculus


Alignment Length:171 Identity:51/171 - (29%)
Similarity:69/171 - (40%) Gaps:40/171 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 EFNDD-----------EDEA-KAATKIQAVFRGHKVRETMK----------KSETKTATNNGSAA 134
            |.||:           ||:| ||||||||.||||..|:.:|          ::|.|...:...|.
Mouse    12 EKNDEDQKIEQDGVKPEDKAHKAATKIQASFRGHITRKKLKGEKKGDAPAAEAEAKEKDDAPVAD 76

  Fly   135 G---------AAPSAAAAEAAASAEPTKA-ELEAEFDPNDKDLCHAALKIQSTFRGHLARKLVNK 189
            |         |...||.|.:..:.||:|| :..:|....:.|...:..|..|. ....|.|....
Mouse    77 GVEKKEGDGSATTDAAPATSPKAEEPSKAGDAPSEEKKGEGDAAPSEEKAGSA-ETESAAKATTD 140

  Fly   190 DAP----EDEDIQEITKKV---AEELDIDLTDPELNKAATK 223
            ::|    ||...:|..|:.   |...|...|.|....||||
Mouse   141 NSPSSKAEDGPAKEEPKQADVPAAVTDAAATTPAAEDAATK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iglNP_477060.1 Adgb_C_mid-like <74..>129 CDD:412094 22/58 (38%)
IQ motif 104..122 CDD:412094 11/27 (41%)
Adgb_C_mid-like <169..>209 CDD:412094 10/46 (22%)
IQ 169..185 CDD:197470 3/15 (20%)
IQ motif 172..189 CDD:412094 4/16 (25%)
globin helix A 196..209 CDD:412094 3/15 (20%)
IQ 216..235 CDD:197470 4/8 (50%)
Gap43NP_032109.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..227 51/171 (30%)
IQ 30..52 CDD:197470 14/21 (67%)
Neuromodulin 73..227 CDD:369001 29/110 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10699
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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