Sequence 1: | NP_611014.1 | Gene: | CG8089 / 36679 | FlyBaseID: | FBgn0033993 | Length: | 624 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006236485.1 | Gene: | Repin1 / 445541 | RGDID: | 1549707 | Length: | 639 | Species: | Rattus norvegicus |
Alignment Length: | 542 | Identity: | 124/542 - (22%) |
---|---|---|---|
Similarity: | 176/542 - (32%) | Gaps: | 204/542 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 141 RSVSQLAGQE-------AHGALR-PKIAALFLPGLRCD------CYKC----ENLPWKKLQDVED 187
Fly 188 HQKTHRYSD---NFHCQICYRRFYLQHSLTSHIIRKSTSSREL---HENKRYKRLLENQKSQEEK 246
Fly 247 ELELSLNKVEDILVPVAEDLQSYFKDESKHPIQKRKTSSLSKCPSCAQNYGFSFSHQLHMVKHRR 311
Fly 312 ERL------------------------------YTNFPFHCSFCNRSFLTRKFLRKHQQRVRTFS 346
Fly 347 TLLYRPFKCPHCTWRFQLKSALDSHVLRIH--ERRKPCLIC---------KLPTSRLCCSAHTSK 400
Fly 401 ECNRAMQKYRDKMRPLREP----PKGGCRKQPTPV--------CKICNRKFTRKFFLEEHMNKAH 453
Fly 454 LNKRNFTCEICGANF---------------------------YSQGT-MQTHRK----------- 479
Fly 480 ------------AVHLLVHTVQ----CEVCDLTIKSKGNYRRH--------------C-KSQSHK 513
Fly 514 DNLVKFGKNNDKTKDSNRRKGA 535 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG8089 | NP_611014.1 | C2H2 Zn finger | 289..309 | CDD:275368 | 6/19 (32%) |
C2H2 Zn finger | 322..343 | CDD:275368 | 6/20 (30%) | ||
C2H2 Zn finger | 355..376 | CDD:275368 | 10/20 (50%) | ||
C2H2 Zn finger | 432..453 | CDD:275368 | 7/20 (35%) | ||
C2H2 Zn finger | 461..486 | CDD:275368 | 12/75 (16%) | ||
C2H2 Zn finger | 490..506 | CDD:275368 | 4/15 (27%) | ||
Repin1 | XP_006236485.1 | C2H2 Zn finger | 146..166 | CDD:275368 | 7/19 (37%) |
C2H2 Zn finger | 174..194 | CDD:275368 | 5/24 (21%) | ||
C2H2 Zn finger | 205..225 | CDD:275368 | 5/19 (26%) | ||
COG5048 | <225..399 | CDD:227381 | 49/214 (23%) | ||
C2H2 Zn finger | 234..254 | CDD:275368 | 7/28 (25%) | ||
C2H2 Zn finger | 266..286 | CDD:275368 | 8/23 (35%) | ||
C2H2 Zn finger | 325..345 | CDD:275368 | 6/20 (30%) | ||
zf-H2C2_2 | 337..362 | CDD:290200 | 12/29 (41%) | ||
COG5048 | <341..612 | CDD:227381 | 70/287 (24%) | ||
C2H2 Zn finger | 353..373 | CDD:275368 | 10/20 (50%) | ||
zf-H2C2_2 | 365..390 | CDD:290200 | 10/25 (40%) | ||
C2H2 Zn finger | 381..401 | CDD:275368 | 4/19 (21%) | ||
C2H2 Zn finger | 449..469 | CDD:275368 | 7/20 (35%) | ||
zf-H2C2_2 | 462..484 | CDD:290200 | 9/22 (41%) | ||
C2H2 Zn finger | 477..497 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 489..514 | CDD:290200 | 0/24 (0%) | ||
C2H2 Zn finger | 505..525 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 533..553 | CDD:275368 | 2/19 (11%) | ||
zf-H2C2_2 | 545..570 | CDD:290200 | 6/24 (25%) | ||
C2H2 Zn finger | 561..581 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 573..598 | CDD:290200 | 4/24 (17%) | ||
C2H2 Zn finger | 589..609 | CDD:275368 | 7/26 (27%) | ||
C2H2 Zn finger | 617..637 | CDD:275368 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24406 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |