DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8089 and REPIN1

DIOPT Version :10

Sequence 1:NP_611014.1 Gene:CG8089 / 36679 FlyBaseID:FBgn0033993 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_001374966.1 Gene:REPIN1 / 29803 HGNCID:17922 Length:626 Species:Homo sapiens


Alignment Length:582 Identity:124/582 - (21%)
Similarity:180/582 - (30%) Gaps:256/582 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 SSGYRR---SVSQLAGQEAHGALR---------PKIAALFLPGLRCD------CYKC----ENLP 178
            |.|.|:   ||:| :|.:|.|...         |...||:|...||.      |.:|    .:.|
Human    94 SRGLRQQGTSVAQ-SGAQAPGRAHRCAHCRRHFPGWVALWLHTRRCQARLPLPCPECGRRFRHAP 157

  Fly   179 WKKLQDVEDHQKTHRYSD---NFHCQICYRRFYLQHSLTSHIIRKSTSSRELH----ENKRYKRL 236
            :..|     |::.|..:.   .|.|.:|.:.|....:|..|:...|.:.|.:.    |.:.::| 
Human   158 FLAL-----HRQVHAAATPDLGFACHLCGQSFRGWVALVLHLRAHSAAKRPIACPKCERRFWRR- 216

  Fly   237 LENQKSQEEKELELSLNKVEDILVPVAEDLQSYFKDESKHPIQKRKTSSLSKCPSCAQNYGFSFS 301
                     |:|...|.:..    |.|.:.:.:.                  |.:|    |.||:
Human   217 ---------KQLRAHLRRCH----PPAPEARPFI------------------CGNC----GRSFA 246

  Fly   302 HQLHMVKHRRERL------------------------------YTNFPFHCSFCNRSFLTRKFLR 336
            ....:|.|:|..:                              ..:.||.|:.|.:.|..:..|.
Human   247 QWDQLVAHKRVHVAEALEEAAAKALGPRPRGRPAVTAPRPGGDAVDRPFQCACCGKRFRHKPNLI 311

  Fly   337 KHQQRVRTFSTLLYRPFKCPHCTWRFQLKSALDSHVLRIHERRKPCLICKLPTSRLCCSAHTSKE 401
            .| :||.|..    ||.:||.|..||..|..|.|| .|||...||               :..||
Human   312 AH-RRVHTGE----RPHQCPECGKRFTNKPYLTSH-RRIHTGEKP---------------YPCKE 355

  Fly   402 CNRAMQKYRDK--------------------------------------------MRPLREPPKG 422
            |.|   ::|.|                                            ::|.:|||.|
Human   356 CGR---RFRHKPNLLSHSKIHKRSEGSAQAAPGPGSPQLPAGPQESAAEPTPAVPLKPAQEPPPG 417

  Fly   423 GCRKQP-TPV--------CKICNRKFTRKFFLEEHMNKAHLNKRNFTCEICGANF---------- 468
            ...:.| .|:        |..|.|.|..:.||..| .:.|..:|.|||..||.||          
Human   418 APPEHPQDPIEAPPSLYSCDDCGRSFRLERFLRAH-QRQHTGERPFTCAECGKNFGKKTHLVAHS 481

  Fly   469 -----------------YSQGT-MQTHRK-----------------------AVHLLVHTVQ--- 489
                             :|||: :..||:                       |.|..:||.:   
Human   482 RVHSGERPFACEECGRRFSQGSHLAAHRRDHAPDRPFVCPDCGKAFRHKPYLAAHRRIHTGEKPY 546

  Fly   490 -CEVCDLTIKSKGNYRRH--------------C-KSQSHKDNLVKFGKNNDKTKDSNRRKGA 535
             |..|......|.|...|              | :|.|.|.||:...|       |:.|.||
Human   547 VCPDCGKAFSQKSNLVSHRRIHTGERPYACPDCDRSFSQKSNLITHRK-------SHIRDGA 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8089NP_611014.1 C2H2 Zn finger 289..309 CDD:275368 6/19 (32%)
SUF4-like 322..>376 CDD:411020 20/53 (38%)
C2H2 Zn finger 322..352 CDD:411020 8/29 (28%)
C2H2 Zn finger 322..343 CDD:275368 6/20 (30%)
C2H2 Zn finger 355..376 CDD:411020 10/20 (50%)
C2H2 Zn finger 355..376 CDD:275368 10/20 (50%)
C2H2 Zn finger 432..453 CDD:275368 7/20 (35%)
C2H2 Zn finger 461..486 CDD:275368 12/75 (16%)
C2H2 Zn finger 490..506 CDD:275368 4/15 (27%)
REPIN1NP_001374966.1 C2H2 Zn finger 118..138 CDD:275368 4/19 (21%)
C2H2 Zn finger 146..166 CDD:275368 5/24 (21%)
C2H2 Zn finger 177..197 CDD:275368 5/19 (26%)
COG5048 <197..371 CDD:227381 49/233 (21%)
C2H2 Zn finger 206..227 CDD:275368 5/30 (17%)
C2H2 Zn finger 238..258 CDD:275368 8/23 (35%)
COG5048 292..599 CDD:227381 77/338 (23%)
C2H2 Zn finger 297..317 CDD:275368 6/20 (30%)
C2H2 Zn finger 325..345 CDD:275368 10/20 (50%)
C2H2 Zn finger 353..373 CDD:275368 6/22 (27%)
C2H2 Zn finger 436..456 CDD:275368 7/20 (35%)
C2H2 Zn finger 464..484 CDD:275368 5/19 (26%)
C2H2 Zn finger 492..512 CDD:275368 5/19 (26%)
C2H2 Zn finger 520..540 CDD:275368 2/19 (11%)
C2H2 Zn finger 548..568 CDD:275368 5/19 (26%)
C2H2 Zn finger 576..596 CDD:275368 7/26 (27%)
C2H2 Zn finger 604..624 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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