DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8089 and znf276

DIOPT Version :9

Sequence 1:NP_611014.1 Gene:CG8089 / 36679 FlyBaseID:FBgn0033993 Length:624 Species:Drosophila melanogaster
Sequence 2:XP_002933710.1 Gene:znf276 / 100486887 XenbaseID:XB-GENE-983669 Length:570 Species:Xenopus tropicalis


Alignment Length:546 Identity:100/546 - (18%)
Similarity:166/546 - (30%) Gaps:196/546 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 DAFEEKNRKVQL------------------EKLAAILDTVSSGYRRSVSQLAGQEAHGALRPKIA 160
            :|..|:.|:.|:                  |::..|..||.:||.|...   |:.:..:||....
 Frog     9 NAASERKRRAQVAVPEGIRSVGCAVQLGRDERIQGIGKTVGTGYCRLCH---GKFSSRSLRHAFG 70

  Fly   161 ALFLPGLRCDCYKCENLPWKKLQDVEDHQKTHRYSDNFH-----------------CQICYRRFY 208
            .:.:.||..:..|               :..|.:..:||                 |:.|:.:||
 Frog    71 KVPVTGLSSEKQK---------------RLDHVFFADFHQLVGVSVRQDPELPQFVCKHCHAQFY 120

  Fly   209 LQHSLTSHIIRK-STSSRELHENKRYKRLLENQKSQEEKELELSLNKVEDILVPVAEDLQSYFKD 272
            ...|:....|:| :||....|.||         ..:....:..:.....|::....|.|.|....
 Frog   121 KCRSVLRTFIQKVNTSPTNPHGNK---------SDKIHDVIGSTTGPCADLITSTPECLHSLVNW 176

  Fly   273 ESKH-------PIQKRKTSS-----LSKCPSCAQNYGFSFSHQLHMVKHRRERLYTNFPFHCSFC 325
            ..||       ||.:|..::     :.....|...:.:........:....:......|      
 Frog   177 THKHAGGCSFLPILQRVMATQYCGIIQAVWECGGGHDYIMQPDSDCISSPAQPEEEMSP------ 235

  Fly   326 NRSFLTRKFLRKHQQRVRTFSTLLYRPFKCPHCTWRFQLKSA-LDSHVL--RIHERRKPCLICKL 387
             ...|:...:  |:...||.....|.|   |.   |....|. ||:.|:  .|.:.|.|......
 Frog   236 -EQGLSGNGI--HRINTRTIPDSEYNP---PD---RINTASVLLDTCVVVNHITQNRTPSPPLAA 291

  Fly   388 P---------TSRLCCSAHTSKECN---------------------------------------- 403
            |         .|.|..:.|:.::|:                                        
 Frog   292 PDSSQGQDCRNSTLASNDHSKEDCSDLSDGDFQSQEEGEPGQQPSSDDSFEPCIAKRNPQKKREP 356

  Fly   404 RAMQK---YRDKMRPLREP------------------PKGGC---------------------RK 426
            |..||   :|:|.:|..:|                  |..||                     |:
 Frog   357 RKSQKLTEFREKKKPGPKPGWKKIKREREELPTIYKCPYQGCTAVYRGADGMKKHIKEHHEEVRE 421

  Fly   427 QPTPVCKICNRKFTRKFFLEEHMNKAHLNKRNFTCEICGANFYSQGTMQTHRKAVHLLVHT---- 487
            :|.| ...||:.|....:|:.|:...|..:||..|:.||     |...|....:||.:.|:    
 Frog   422 RPCP-HPGCNKVFMIDRYLQRHVKLIHTEERNHICDQCG-----QAFKQRKHLSVHQMRHSGAKP 480

  Fly   488 VQCEVCDLTIKSKGNYRRHCKSQSHK 513
            :|||||....:.:.:.:.|  ...||
 Frog   481 LQCEVCGFQCRQRASLKYH--MTKHK 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8089NP_611014.1 C2H2 Zn finger 289..309 CDD:275368 1/19 (5%)
C2H2 Zn finger 322..343 CDD:275368 2/20 (10%)
C2H2 Zn finger 355..376 CDD:275368 6/23 (26%)
C2H2 Zn finger 432..453 CDD:275368 5/20 (25%)
C2H2 Zn finger 461..486 CDD:275368 7/24 (29%)
C2H2 Zn finger 490..506 CDD:275368 4/15 (27%)
znf276XP_002933710.1 SFP1 <320..476 CDD:227516 28/161 (17%)
C2H2 Zn finger 427..447 CDD:275368 5/19 (26%)
C2H2 Zn finger 455..475 CDD:275368 7/24 (29%)
C2H2 Zn finger 483..503 CDD:275368 5/21 (24%)
C2H2 Zn finger 513..530 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24406
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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