DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chn and ZNF518B

DIOPT Version :9

Sequence 1:NP_001246331.1 Gene:chn / 36678 FlyBaseID:FBgn0015371 Length:1286 Species:Drosophila melanogaster
Sequence 2:NP_001362745.1 Gene:ZNF518B / 85460 HGNCID:29365 Length:1074 Species:Homo sapiens


Alignment Length:1087 Identity:196/1087 - (18%)
Similarity:328/1087 - (30%) Gaps:373/1087 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 SHHSGGRGNVTINSAGVNIDNA---------FLEAQRHPTSSSMSIVETIEAVASATDMPLAQLK 441
            :|.:||..::|::....:.:.|         .|..|.....::|..:.|.....|...:.|..|:
Human    11 THLNGGHNSLTMSPKQPDANGAPRPNRQEAQTLLYQGSEAEAAMMTIATCAKCKSVHKISLQDLQ 75

  Fly   442 QEKMDDGAGVVLPLHVGVMQQPVASSSSGSSGSHGGNGNGGSGSGL--------LKPKR------ 492
            :....||..|.....:|.........|:.||.:|.||......|.:        .||.:      
Human    76 KGTGKDGMYVCFQCSLGAAPPNFHFVSNNSSATHVGNKTENFSSSVNSKFKVRNFKPGKYYCDKC 140

  Fly   493 ------------------EKRFTCCYCPWSGADKWGLKRHLNTHTK--PFVCLLCDYKAARSERL 537
                              |.:|.|.:|.:....|...:|||..||.  |:.|..|||.|.|::.:
Human   141 RFSTKDPLQYKKHTLQHEEIKFICSHCSYISYTKGEFQRHLVKHTGIFPYQCEYCDYGAIRNDYI 205

  Fly   538 ATHVLKVHNKRACSKCSYLADTQEEYQAHMSDVHPHDNRPARSGNGNQ----------------- 585
            ..|..:|| :||.:|....|..:.|              |.|:|...|                 
Human   206 VKHTKRVH-ERAGAKRPVKAVAKLE--------------PKRTGTSKQNPELLKASNPRTTFQNK 255

  Fly   586 -----SGGSSSGNSNGNGGGNGNNNANAGGHSQNLNVLR----------TIGNSLVAN--NQLNT 633
                 ||.|...|.:               ...|:.:|.          .|.|.:..:  |::|.
Human   256 WSDQLSGFSLHANKD---------------KMHNIMLLPEPKEYQKDVVCIPNKMTLSEPNEVNL 305

  Fly   634 YAGNAFGSSSGNVGNANGGGGAVTIYTTTTNEGVAGGGGGGGGGISGNISGGGPLQEI----IVN 694
            :       .:.||        .|.:.:.....                :..|.||..:    :|.
Human   306 F-------ENKNV--------EVEVLSPAKEP----------------VQPGMPLTVVAPAELVV 339

  Fly   695 PSSMVGWRLS---ANGS------LIP--PHDLLTGGLPNAATQKR-----GSERLFQYLEAE--- 740
            |::.:...:.   .||:      |.|  .::.|..|..|....:|     ||....:.|.||   
Human   340 PANCLAQLIDVKVVNGTQQLVLKLFPLEENNCLEAGRDNGGNSERMVKEKGSNEQEKVLSAEKTK 404

  Fly   741 ------------GSDP---------------EDYARLLKMDAISRN-----TASVAQDFHKAGGV 773
                        |.|.               ..|..::...::..|     .:...:||.|.   
Human   405 SLTVDGNVGKLVGIDSFQPSVQKQLKNVKWVRSYDFIMPNSSVHNNGKSFINSETIEDFQKK--- 466

  Fly   774 HELKIPANHQLLFNNKLPSQWTTREAAALLYSLSNMGGGSASSVSGSQRQKFGMRA--------- 829
                         ||..|.:......|...:||:::...|.....|:....|..:|         
Human   467 -------------NNLYPHRTAFPSVALKGHSLASVFKNSVLRSLGAASNPFPYKAAVCFAESGR 518

  Fly   830 RQHSTGEDDENTPSSASSSSFSGDEFNMSATSPLKLSRHAIKLEKMDEMDAKDMGPTKAMMATAF 894
            ..||:.:......:|.::.||||::                .|..:.|.|               
Human   519 NLHSSSQQLLPFAASPATCSFSGEK----------------GLLPVSEND--------------- 552

  Fly   895 LEAANYEQTAIELLASKRKIKVENDNDEDQENQQH-------QPHQQHHSQQQQ-----QQRLQL 947
            ||:.:.....:::::|.||       .||.:.::|       |...||.|:...     :.|.|.
Human   553 LESTSKVNIPVKVVSSNRK-------QEDNQTEEHKAVSTVGQISSQHKSEYLHINITGEDRSQQ 610

  Fly   948 IKSSPAYKLNNNNNNNSNNNNYYKDKTSHRNAVHHHRQDDKENNKTKS---------------PG 997
            ....|....|:...||:|:........|..:...:..:..|.|:.|..               ..
Human   611 PGDKPLELKNSERTNNTNDGPVISSVFSLSSGSENVPEGIKWNSSTSKIKSIELLRRKIAQLIES 675

  Fly   998 TAAVSVAAAAATSPPSISGPSNQTPFLTQMEYQNLNRIGTQFQNYVKDIINKYYAAETPLMLAAA 1062
            ....|..|:.:....|:...|..|...|....|.:|                             
Human   676 CGKPSSLASNSAHRRSVGQASKGTSKATSEGIQEIN----------------------------- 711

  Fly  1063 AAALPTATTTGQQQQPELDIENLSPSKRRRLLSETEEYIEYLRNKEDITLTIAPKVQPPAPVTSL 1127
            .:......:||..|:|..|    ......|.|:..:.|..:.......|             .|.
Human   712 VSLTGLGHSTGTLQKPPND----GGITGNRQLTHQQIYPHFADGSNRKT-------------KSR 759

  Fly  1128 LKRQLDLSTPRRSPKKAAPAHSNSASNASRKSLNQLATLLPLLADAASQQEYLAAPLDFSKKSSS 1192
            :.|:..::||...||.|.....||:.||   .:.:.....|:....:.:|  |..|:.|.....:
Human   760 VARKAHVATPVLIPKGAVLRVLNSSENA---HIIEATCEAPVSIPCSERQ--LIKPVPFCPVRQA 819

  Fly  1193 RKQAQPKK-----IRLTPEAVVTLLRDKYLNRMVRQRLGCLKCNQLRKNSSISFNYH-------- 1244
            ....||.:     |.::|. :.|.||.|                 |||.|::....|        
Human   820 DSDLQPLRSERGPIDMSPN-IETPLRPK-----------------LRKESAVCSTIHRKTGLLYG 866

  Fly  1245 TLGSLALHKYWRHGRLGSSS---TRREKLQAALQKRISRGQAD--KC 1286
            ..||..|:|   .|||.|.|   :|.:..|..|.::.::.||:  :|
Human   867 QQGSSELNK---QGRLLSRSLSISRNKTKQVHLSRKKNKIQAEPSRC 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chnNP_001246331.1 C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..356 CDD:275368
C2H2 Zn finger 498..518 CDD:275368 6/19 (32%)
C2H2 Zn finger 524..545 CDD:275368 7/20 (35%)
ZNF518BNP_001362745.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 12..36 5/23 (22%)
C2H2 Zn finger 137..157 CDD:275368 0/19 (0%)
zf-H2C2_5 164..186 CDD:372805 7/21 (33%)
C2H2 Zn finger 164..184 CDD:275368 6/19 (32%)
C2H2 Zn finger 192..213 CDD:275368 7/20 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 568..590 7/28 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..632 7/28 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 678..704 5/25 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24392
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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