Sequence 1: | NP_001246331.1 | Gene: | chn / 36678 | FlyBaseID: | FBgn0015371 | Length: | 1286 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001178593.1 | Gene: | Rbak / 288489 | RGDID: | 1562875 | Length: | 711 | Species: | Rattus norvegicus |
Alignment Length: | 415 | Identity: | 85/415 - (20%) |
---|---|---|---|
Similarity: | 136/415 - (32%) | Gaps: | 103/415 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 214 VNQQQQQQQQPHQSTPKSK---------KHRQEHAAELIYASPSTSANAAQNLAQSTPTSAPSNS 269
Fly 270 SGGS----TSSSGGGGGRKKAAQAAAAAAAANGVHIQKRYACTHCPYSTDRRDLYTRHENIHKDE 330
Fly 331 KPFQCYACLKQFNRADHVKKHFLRMHRELQ----------YDINKT-RRHVSAGS-------GSS 377
Fly 378 GSGS---------SGSGSHHSGGRGNVTINSAGVNIDNAFLE----AQRHPTSSSMSIVETIEAV 429
Fly 430 ASATDMPLAQLKQEKMDDGAGVVLPLHVGVMQQPVASSSSGSSGSHGGNGNGGSGSGLLKPKR-- 492
Fly 493 --EKRFTCCYCPWSGADKWGLKRHLNTHT--KPFVCLLCDYKAARSERLATHVLKVHNKR--ACS 551
Fly 552 KC-------SYLADTQEEYQAHMSD 569 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
chn | NP_001246331.1 | C2H2 Zn finger | 307..327 | CDD:275368 | 5/19 (26%) |
C2H2 Zn finger | 335..356 | CDD:275368 | 7/20 (35%) | ||
C2H2 Zn finger | 498..518 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 524..545 | CDD:275368 | 5/20 (25%) | ||
Rbak | NP_001178593.1 | KRAB | 8..68 | CDD:214630 | |
KRAB | 8..47 | CDD:279668 | |||
COG5048 | 255..694 | CDD:227381 | 85/415 (20%) | ||
C2H2 Zn finger | 260..280 | CDD:275368 | |||
C2H2 Zn finger | 288..308 | CDD:275368 | 1/4 (25%) | ||
zf-H2C2_2 | 301..323 | CDD:290200 | 3/19 (16%) | ||
zf-C2H2 | 314..336 | CDD:278523 | 2/21 (10%) | ||
C2H2 Zn finger | 316..336 | CDD:275368 | 2/19 (11%) | ||
zf-H2C2_2 | 328..351 | CDD:290200 | 4/26 (15%) | ||
C2H2 Zn finger | 344..364 | CDD:275368 | 2/19 (11%) | ||
zf-H2C2_2 | 356..381 | CDD:290200 | 3/24 (13%) | ||
C2H2 Zn finger | 372..392 | CDD:275368 | 5/19 (26%) | ||
zf-C2H2 | 398..420 | CDD:278523 | 6/21 (29%) | ||
C2H2 Zn finger | 400..420 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 413..437 | CDD:290200 | 10/23 (43%) | ||
C2H2 Zn finger | 428..448 | CDD:275368 | 7/20 (35%) | ||
C2H2 Zn finger | 456..476 | CDD:275368 | 3/19 (16%) | ||
C2H2 Zn finger | 510..530 | CDD:275368 | 6/23 (26%) | ||
C2H2 Zn finger | 538..558 | CDD:275368 | 1/19 (5%) | ||
C2H2 Zn finger | 566..586 | CDD:275368 | 7/27 (26%) | ||
zf-H2C2_2 | 578..603 | CDD:290200 | 6/24 (25%) | ||
C2H2 Zn finger | 594..614 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 606..631 | CDD:290200 | 7/24 (29%) | ||
C2H2 Zn finger | 622..642 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 634..659 | CDD:290200 | 4/24 (17%) | ||
C2H2 Zn finger | 650..670 | CDD:275368 | 6/22 (27%) | ||
zf-H2C2_2 | 662..687 | CDD:290200 | 4/15 (27%) | ||
C2H2 Zn finger | 678..698 | CDD:275368 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24392 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |