DRSC/TRiP Functional Genomics Resources

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Protein Alignment chn and Zfp959

DIOPT Version :9

Sequence 1:NP_001246331.1 Gene:chn / 36678 FlyBaseID:FBgn0015371 Length:1286 Species:Drosophila melanogaster
Sequence 2:NP_663465.1 Gene:Zfp959 / 224893 MGIID:2385058 Length:539 Species:Mus musculus


Alignment Length:621 Identity:118/621 - (19%)
Similarity:181/621 - (29%) Gaps:199/621 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GQSSNVEATY-----EDMFKEITRKLY--------GEETGNGLHTLGTPVAQVATSGPTAVPEGE 67
            |:..|..:.|     .::|....|:.|        |.|....|..||.||               
Mouse    63 GRCINCPSAYGKKQCTNLFPRTIRRRYVVTPFVRRGGECDTSLQVLGFPV--------------- 112

  Fly    68 QRSFTNLQQLDRSAAPSIEYESSAAGASGNNVATT----------------QANVIQQQQQQQQQ 116
              |....|..||...||::.||..:.....::.|.                :|.....|::.|..
Mouse   113 --SVGIHQNTDRGEKPSVDKESGKSPVCPGSLCTCRVTHSIGECYECSQCGKALSCSLQRRVQTH 175

  Fly   117 AESGNSVVVTASSGATVVPAPSVAAVGGFKSEDHLSTAFGLAALMQNGFAAGQAGLLKAGEQQQR 181
            ...||.....:|...|                                              ..|
Mouse   176 MGKGNDKCEPSSKSLT----------------------------------------------HPR 194

  Fly   182 WAQDGSGLVAAAAAEPQLVQWTSGGKLQSYAHVNQQQQQQQQPHQSTPKSKKHRQEHAAELIYAS 246
            :.|    :...|..|..|..|...||.....|        |:.|..   .|.....|..:||   
Mouse   195 YLQ----IQKTAYNEEDLYVWNQCGKSSLQLH--------QRNHLG---MKSCEYNHEDKLI--- 241

  Fly   247 PSTSANAAQNLAQSTPTSAPSNSSGGSTSSSGGGGGRKKAAQAAAAAAAANGVHI-QKRYACTHC 310
                  :.||..|...|:.      ..|.......|  ||....:.......:|. :|.|.|:.|
Mouse   242 ------SHQNCNQVGRTNT------RDTKHDYHQWG--KAFTCPSYLQIYERIHTEEKPYECSQC 292

  Fly   311 PYSTDRRDLYTRHENIHKDEKPFQCYACLKQFNRADHVKKHFLRMHRELQYDINKTRRHVSAGSG 375
            ..:.........||.||..|||::|..|.|.|     ..|.:|::|.::                
Mouse   293 GRAFTCHSTLQIHERIHTGEKPYKCNQCDKTF-----ACKRYLQIHEKI---------------- 336

  Fly   376 SSGSGSSGSGSHHSGGRGNVTINSAGVNIDNAFLEAQRHPTSSSMSIVETIEAVASATDMPLAQL 440
                        |:|.: ....|..|..     ...:|:     :.:.|.|.|...     |.:.
Mouse   337 ------------HTGEK-PYKCNQCGKT-----FACKRY-----LQVHERIHAAEK-----LYKC 373

  Fly   441 KQEKMDDGAGVVLPLH--VGVMQQPVASSSSGSSGSHGGNGNGGSGSGLLKPKR----EKRFTCC 499
            .|..........|.:|  :...::|...:..|.:.:        ..|.|.|.:|    |||:.|.
Mouse   374 NQCGKAFACNSYLQMHERIHTGEKPYKCNHCGKAFA--------CNSNLQKHERIHTGEKRYKCK 430

  Fly   500 YCPWSGADKWGLKRHLNTHT--KPFVCLLCDYKAARSERLATHVLKVHNKR---ACSKCSYLADT 559
            .|..:.|....|::|..|||  ||:.|..|.........|..|. ::|...   .|::|....|.
Mouse   431 QCGKAFAYSSNLQKHERTHTGEKPYKCNQCGKAFTCHSSLQIHE-RIHTGEKPYKCNQCGKPFDR 494

  Fly   560 QEEYQAHMSDVHPHDNRPARSGNGNQSGGSSSGNSN 595
            :.....| ..:|..: :|...   ||.|.|.:.:|:
Mouse   495 KRYLHIH-ERIHTGE-KPYEC---NQCGKSFAYSSS 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chnNP_001246331.1 C2H2 Zn finger 307..327 CDD:275368 4/19 (21%)
C2H2 Zn finger 335..356 CDD:275368 6/20 (30%)
C2H2 Zn finger 498..518 CDD:275368 5/19 (26%)
C2H2 Zn finger 524..545 CDD:275368 4/20 (20%)
Zfp959NP_663465.1 KRAB 4..>45 CDD:214630
KRAB 4..41 CDD:279668
C2H2 Zn finger 265..281 CDD:275368 3/17 (18%)
C2H2 Zn finger 289..309 CDD:275368 4/19 (21%)
zf-H2C2_2 302..326 CDD:290200 11/28 (39%)
C2H2 Zn finger 317..337 CDD:275368 7/52 (13%)
zf-H2C2_2 329..354 CDD:290200 6/58 (10%)
C2H2 Zn finger 345..365 CDD:275368 4/29 (14%)
COG5048 <369..502 CDD:227381 32/147 (22%)
C2H2 Zn finger 373..393 CDD:275368 3/19 (16%)
zf-H2C2_2 385..410 CDD:290200 4/32 (13%)
C2H2 Zn finger 401..421 CDD:275368 5/27 (19%)
zf-H2C2_2 413..438 CDD:290200 8/24 (33%)
C2H2 Zn finger 429..449 CDD:275368 5/19 (26%)
zf-H2C2_2 441..466 CDD:290200 9/24 (38%)
C2H2 Zn finger 457..477 CDD:275368 4/20 (20%)
zf-H2C2_2 469..494 CDD:290200 5/25 (20%)
C2H2 Zn finger 485..505 CDD:275368 4/20 (20%)
zf-H2C2_2 501..522 CDD:290200 7/25 (28%)
C2H2 Zn finger 513..533 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24392
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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