DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7639 and Samm50

DIOPT Version :9

Sequence 1:NP_995838.1 Gene:CG7639 / 36675 FlyBaseID:FBgn0033989 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001004241.1 Gene:Samm50 / 300111 RGDID:1303219 Length:469 Species:Rattus norvegicus


Alignment Length:477 Identity:162/477 - (33%)
Similarity:244/477 - (51%) Gaps:53/477 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPKSGRDGGA----------SKDSKYD-LSKISARVDRVNVSGLLRTHNDYVMRAADGLFKASNF 54
            :|.||.|.||          ..::|.: |......|..|:..||.||.:|.::.....:|||.|.
  Rat    12 LPSSGTDFGALGEEAEFVEVEPEAKQEILENKDVVVQHVHFDGLERTKDDIIICEIGEVFKAKNL 76

  Fly    55 QDLMLEAMSTKSYLHELGIFKDVSVHIDVSRGADASPQGYEVTFKGNEMSRMMGSAGTEIGQNEG 119
            .::|..:...:..|..||||:.|.|.||...|.||.|.|.:|||:..|:.|:.||..|.:|.|||
  Rat    77 IEVMRRSHEAREKLLRLGIFRQVDVLIDTCHGEDALPNGLDVTFEVTELRRLTGSYNTMVGNNEG 141

  Fly   120 SLRTELTIPNILGRGENISLQGSYSSTRANDLQLKFWKPFFHTRFKENRPEMSFSIFRQTDRFDI 184
            |:...|.:||:|||.|.::.|.|| .|:.....|.|:|| ....|::|   .|.::::.|.:|..
  Rat   142 SMVLGLKLPNLLGRAEKVTFQFSY-GTKETSYGLSFFKP-QPGNFEKN---FSVNLYKVTGQFPW 201

  Fly   185 SSFQTTNIGYLVDFSAHTMVGVDLTHSLQYENAIRDVGLLNKSVPFAIRDHCGPKLASLLRYSVV 249
            ||.:.|:.|...::|...   ...:|::::|...|::|.|.::..||:|...|..|.|.|.:::|
  Rat   202 SSLRETDRGVSAEYSFPL---CKTSHTVKWEGVWRELGCLARTASFAVRKESGHSLKSSLSHAMV 263

  Fly   250 YDNRDGNVFPTRGIYLKSVNEYCG-LGGNVAYTSSTAHGELNVPLFAGLVAQFCARVGVVKETKN 313
            .|:|:.::.|.||..||...|..| .||:|::.......:||.||....|.......|::     
  Rat   264 IDSRNSSILPRRGALLKVNQELAGYTGGDVSFIKEDFELQLNKPLVLDSVFSTSLWGGML----- 323

  Fly   314 TTQLPI----SSL---FYCGGPLTLRGFKFGGAGPVVESTPIGAQSFWCTGAHLWAPLPF---AG 368
               :||    ||:   ||.|||.::|||.....||..|...:|.:::|..|.||:.||||   .|
  Rat   324 ---VPIGDKLSSIADRFYLGGPTSVRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQG 385

  Fly   369 VFKNLASHFRMHFFYNIGN--NNSFS----------TENMRSAFGMGLAVKLAERARIELNYCVP 421
            .|..|   ||.|||.|.||  |.::.          .|.:|.::|.|:.::|...||:|||||:|
  Rat   386 GFGEL---FRTHFFLNAGNLCNLNYGEGPRAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCIP 447

  Fly   422 VRHQDTDRILNGFQFGIGYEFV 443
            :..|..|||.:|.|||.|..|:
  Rat   448 MGVQRGDRICDGVQFGAGIRFL 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7639NP_995838.1 Bac_surface_Ag 129..442 CDD:279448 112/335 (33%)
Samm50NP_001004241.1 POTRA 45..124 CDD:284624 29/78 (37%)
Bac_surface_Ag 151..468 CDD:279448 112/335 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341890
Domainoid 1 1.000 166 1.000 Domainoid score I3792
eggNOG 1 0.900 - - E1_COG4775
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 240 1.000 Inparanoid score I3265
OMA 1 1.010 - - QHG56599
OrthoDB 1 1.010 - - D242907at33208
OrthoFinder 1 1.000 - - FOG0003150
OrthoInspector 1 1.000 - - oto98313
orthoMCL 1 0.900 - - OOG6_102372
Panther 1 1.100 - - LDO PTHR12815
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4093
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.770

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