DRSC/TRiP Functional Genomics Resources

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Protein Alignment pcs and sh3bp5b

DIOPT Version :10

Sequence 1:NP_611010.4 Gene:pcs / 36674 FlyBaseID:FBgn0033988 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_998623.1 Gene:sh3bp5b / 406767 ZFINID:ZDB-GENE-040426-2813 Length:446 Species:Danio rerio


Alignment Length:298 Identity:126/298 - (42%)
Similarity:180/298 - (60%) Gaps:18/298 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SAEDGELDPQIQIELENLNSATDEINKLEIELEEANSTFRILLNESTRRLKVSSKKLGNCIEKAR 67
            |.|:.|:||:||.|||.||.:||:||:.|.|||:|...||.:|.|:|.:|....||:|..:|:::
Zfish    16 SPEEEEVDPRIQGELEKLNQSTDDINRCETELEDARQKFRSVLVEATLKLDELVKKIGKAVEESK 80

  Fly    68 PYYEALDKAREAQIECQKAAVKFQRANEIHAAAKETVALAEQRFMSNSHEWQFDNAWQEMLNHAT 132
            ||:||...||:.|:|.|::...||||.|:..|||||:||||||.:.:... |||:||:|||||||
Zfish    81 PYWEARRVARQTQLEAQRSTQDFQRATEVLRAAKETIALAEQRLLEDDKR-QFDSAWREMLNHAT 144

  Fly   133 QKVMDAETQKADCHAEHQRLTKLFNAAEQKLQQLEDRFRRSINKSRPYFEEKQVCQDQLQTQKNR 197
            |:||:||..|......|:.....:.||..:::|.|.:.:|:||||:||||.|.....||:..|..
Zfish   145 QRVMEAEQIKTRSELLHKETAANYTAAMSRMKQQEKKLKRTINKSKPYFEMKAKYYLQLEQLKKN 209

  Fly   198 IQELQQQVAGAKSTYSTALRNLERISEDIHRQRGDFPTPPGPREPGVGAELNSPTSSALPSLPDF 262
            :.:||.::..||..|.:|||.||.||::||.:|.....  ||||.|||||.:.....   .|..|
Zfish   210 VDDLQAKLTQAKGEYKSALRKLEMISDEIHERRRSLGI--GPRERGVGAEGDGVIGE---DLSGF 269

  Fly   263 QLELEKCDYPSIAGSQMSLGAKTPQ----AAAETEDEE 296
            ::|.:        |..|:.|:...:    :|...||.|
Zfish   270 KMESD--------GISMASGSYEDENCSTSAMSEEDSE 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pcsNP_611010.4 SH3BP5 8..235 CDD:461608 105/226 (46%)
sh3bp5bNP_998623.1 SH3BP5 22..244 CDD:461608 104/222 (47%)

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