DRSC/TRiP Functional Genomics Resources

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Protein Alignment pcs and rei-2

DIOPT Version :9

Sequence 1:NP_611010.4 Gene:pcs / 36674 FlyBaseID:FBgn0033988 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_508206.2 Gene:rei-2 / 180461 WormBaseID:WBGene00019365 Length:431 Species:Caenorhabditis elegans


Alignment Length:409 Identity:115/409 - (28%)
Similarity:192/409 - (46%) Gaps:43/409 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EDGE--LDPQ----IQIELENLNSATDEINKLEIELEEANSTFRILLNESTRRLKVSSKKLGNCI 63
            |||.  |:.:    |..|||.||.:||.|||:|::|:.|.:.||....:.:.:||..||:..:.|
 Worm    25 EDGHPPLETRHLNMIHEELEKLNISTDVINKMEVQLDLARADFRETQVQWSEKLKELSKQYSSQI 89

  Fly    64 EKARPYYEALDKAREAQIECQKAAVKFQRANEIHAAAKETVALAEQRFMSNSHEWQFDNAWQEML 128
            .||||:||...|.|..:.|.||||.:|:||..|...||:.|:|.::   |.|.:........|:|
 Worm    90 AKARPFYELKIKERSLREESQKAAERFERATSILGIAKQQVSLTQE---SLSRQTSVLPECLEVL 151

  Fly   129 NHATQKVMDAETQKADCHAEHQRLTKLFNAAEQKLQQLEDRFRRSINKSRPYFEEKQVCQDQLQT 193
            ||..|:|.:.|.::....:.|...........:|::.:|...|.:|.|||.|||::......|:.
 Worm   152 NHHIQRVREVEEERTAAESLHASKAHAMLHLAEKIRAMEKDNRYAIKKSRLYFEKRLEFTKILEA 216

  Fly   194 QKNRIQELQQQVAGAKSTYSTALRNLERISEDIHRQRGDFPTPPGPREPGVGAELNSPTSSALPS 258
            ||..|..|:.:|...|:.|:|:|||||||||.||.:|                     ::.:|.|
 Worm   217 QKATILCLEAEVRQKKNDYTTSLRNLERISERIHEER---------------------STGSLES 260

  Fly   259 LPDFQLELEKCDYPSIAGSQMSLGAKTPQAAAETEDEEDACDYDETGAGELRGVV--------DE 315
            ......|.:|.|:.|   |:...|...|.|.......||....|:.....:..::        ::
 Worm   261 AVSSDQEDQKSDFKS---SESLPGNPPPYAPTAPPPYEDKYIIDKDDDSIVLNMIKTEQEEEGEK 322

  Fly   316 RDLEALRQKVKILAVRPIEGGDGQQQNDVW--EHELKATVDKLDHLMMLKETAKRQQTNRLKSTE 378
            |:..:|...|.:||.:.|..|:..:::::.  .|..:|.:......:.|.:.:...:.:.|.|..
 Worm   323 RNSRSLGSGVILLAQQLIGNGNSTEKHNITPPRHGEEADISYHTRPVGLSDGSDNSEVSSLASFN 387

  Fly   379 QRPDSLGAEALKRHCDVVE 397
            ...|...::.|..|.::::
 Worm   388 IGDDDTVSKMLMSHSELIK 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pcsNP_611010.4 SH3BP5 8..235 CDD:283045 84/232 (36%)
rei-2NP_508206.2 SH3BP5 33..259 CDD:283045 83/249 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162249
Domainoid 1 1.000 132 1.000 Domainoid score I3180
eggNOG 1 0.900 - - E1_KOG2008
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I3147
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003963
OrthoInspector 1 1.000 - - mtm4787
orthoMCL 1 0.900 - - OOG6_104684
Panther 1 1.100 - - LDO PTHR19423
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3845
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.820

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