DRSC/TRiP Functional Genomics Resources

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Protein Alignment pcs and rei-1

DIOPT Version :10

Sequence 1:NP_611010.4 Gene:pcs / 36674 FlyBaseID:FBgn0033988 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001379059.1 Gene:rei-1 / 175526 WormBaseID:WBGene00007270 Length:244 Species:Caenorhabditis elegans


Alignment Length:245 Identity:76/245 - (31%)
Similarity:130/245 - (53%) Gaps:33/245 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSAEDGELDPQIQIELENLNSATDEINKLEIELEEANSTF---RILLNESTRRLKVSSKKLGNC 62
            |:..:|..:  .|:.:|||||:|||:||..|::||.....|   :::.|:....:   .|||...
 Worm     1 MTEGDDQLI--SIRKQLENLNNATDDINSYEMKLETVKKQFCETQLMFNKEMLGI---PKKLAKH 60

  Fly    63 IEKARPYYEALDKAREAQI-EC-QKAAVKFQRANEIHAAAKETVALAEQRFMSNSHEWQFDNAWQ 125
            |.|:|.:::.  |:||::| .| |:||.:|:|.......|:|.|.:.... ::|:.|...:..:.
 Worm    61 ISKSRQFFDL--KSRESEIRRCVQQAAAQFERQKTSVEMAREQVQILHNS-LNNNQELDAEKQYV 122

  Fly   126 EMLNHATQKVMDAETQ--KAD-CHAEHQRLTKLFNAAEQKLQQLEDRFRR-------SINKSRPY 180
            :::....:.|.:||.:  ||: |||...|          .|.|||...|:       :|.|||||
 Worm   123 DVIEQQLELVKEAEGECLKAEKCHASRVR----------DLLQLEMALRKCLEENGSAIKKSRPY 177

  Fly   181 FEEKQVCQDQLQTQKNRIQELQQQVAGAKSTYSTALRNLERISEDIHRQR 230
            :|.|:|....:.:|...:..|:.:|...|.:||.::|.||:||:.||::|
 Worm   178 YERKEVLTRTMNSQLELMSILEHEVQERKDSYSDSMRALEQISDQIHQER 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pcsNP_611010.4 SH3BP5 8..235 CDD:461608 74/238 (31%)
rei-1NP_001379059.1 SH3BP5 5..227 CDD:461608 74/239 (31%)

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