DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pcs and sh3bp5l

DIOPT Version :9

Sequence 1:NP_611010.4 Gene:pcs / 36674 FlyBaseID:FBgn0033988 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001093720.1 Gene:sh3bp5l / 100101740 XenbaseID:XB-GENE-920564 Length:373 Species:Xenopus tropicalis


Alignment Length:330 Identity:136/330 - (41%)
Similarity:185/330 - (56%) Gaps:43/330 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SAEDG-------ELDPQIQIELENLNSATDEINKLEIELEEANSTFRILLNESTRRLKVSSKKLG 60
            |:.||       ||||:||.|||.||.|::|||.||::|:||.:.:|.:|.||.|||...:.:||
 Frog    44 SSNDGKKEEIEEELDPRIQEELERLNQASEEINLLELQLDEARTAYRRILTESARRLNGLATQLG 108

  Fly    61 NCIEKARPYYEALDKAREAQIECQKAAVKFQRANEIHAAAKETVALAEQRFMSNSHEWQFDNAWQ 125
            .||:||||||||...|:|||.:...||::::||..:||||:|.|.:|||...::.:  :.|..||
 Frog   109 ACIDKARPYYEARRLAKEAQQDTHSAALRYERAVSMHAAAREMVFVAEQGVTADKN--RLDPTWQ 171

  Fly   126 EMLNHATQKVMDAETQKADCHAEHQRLTKLFNAAEQKLQQLEDRFRRSINKSRPYFEEKQVCQDQ 190
            |||||||.||.:||.::.....||||:|:..:.||.|:|.|:...:|.|.|||||||.|......
 Frog   172 EMLNHATCKVNEAEEERLRSEFEHQRVTRQCHEAEAKVQTLQKSLKRFIIKSRPYFELKSQLNTI 236

  Fly   191 LQTQKNRIQELQQQVAGAKSTYSTALRNLERISEDIHRQRGDFPTPPGPREPGVGAELNSPTS-- 253
            |:..|:|:..|:..||.||..||..|||||:|||:||.:|.. .:....|.|.:|||  :|.|  
 Frog   237 LEEHKSRVTSLENSVAQAKLRYSGTLRNLEQISEEIHARRTQ-SSLLSQRAPPLGAE--APPSVK 298

  Fly   254 ----------SALPSLPDFQLELEKCDYPSIAGSQMSLGAKTPQAAAETEDEEDACDYD--ETGA 306
                      .:|.||.....:|:|.|                 :.....|..|....|  ||||
 Frog   299 DGETGPPADTVSLLSLQTIASDLQKSD-----------------SVEHLRDLTDVTSLDGRETGA 346

  Fly   307 GELRG 311
            .|..|
 Frog   347 VECGG 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pcsNP_611010.4 SH3BP5 8..235 CDD:283045 111/226 (49%)
sh3bp5lNP_001093720.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 3/8 (38%)
SH3BP5 55..283 CDD:368365 111/230 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 276..305 8/31 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..373 5/8 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D258813at33208
OrthoFinder 1 1.000 - - FOG0003963
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19423
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3845
SonicParanoid 1 1.000 - - X5780
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.050

Return to query results.
Submit another query.