DRSC/TRiP Functional Genomics Resources

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Protein Alignment ckn and Sash3

DIOPT Version :10

Sequence 1:NP_611009.1 Gene:ckn / 36673 FlyBaseID:FBgn0033987 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_001300678.1 Gene:Sash3 / 74131 MGIID:1921381 Length:381 Species:Mus musculus


Alignment Length:426 Identity:84/426 - (19%)
Similarity:147/426 - (34%) Gaps:120/426 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 SGPLRHHQNHQADDGISMSGSSIVSSPSLEEGGFNLPRETSVAL--------------RLKDEVG 114
            |.|:...:....||.|....|.:::.....:.|..|.::....:              .|.:|:|
Mouse    37 SSPVVSEKEFNLDDNIPEDDSGVLTPEDSGKSGKKLGKKWRAVISRTMNRKMGKMMVKALSEEMG 101

  Fly   115 GT---STAAPTTGGPGGGGATVVGAPPPGAGKPGVAMVPPPPVFCATLREPLTHKAAVYYHQQ-- 174
            .|   .:|:||:                    |..::..|.|           .|.|:.:.:|  
Mouse   102 DTLEEGSASPTS--------------------PDCSLDSPGP-----------EKMALAFTEQEE 135

  Fly   175 -----LALQEDQGIDLTQSPGRDSPGSSSGSAGSGSRHSTASLDSGRASSYLTGVSSSGASIRAP 234
                 |:.|...|.:|.      |||..|||          .|:...|..| ||.....|.:...
Mouse   136 REPPSLSRQTSTGSELC------SPGPGSGS----------FLEESPAPQY-TGPFCGRARVHTD 183

  Fly   235 LSSPRCSSVSSCSIGSVDRQRNDELII-------DW--LLEMKHEEYAQLFIAAGYDLPTIARMT 290
            .:.      |.....|:..|:.|.:.|       .|  ||..|...:..:::          .:.
Mouse   184 FTP------SPYDHDSLKLQKGDVIQIVEKPPVGTWLGLLNGKLGSFKFIYV----------DVL 232

  Fly   291 PEDLTAIGIKNPHHRERIKQRIDKLQVLDNLPHFVPGSIEEWLQLLRLEEYIQPLLEQNYKTVRD 355
            ||:  |:|...|..|:...:|          |.  |.::.|.|:.:.|||:...||...|:|:.|
Mouse   233 PEE--AVGPVRPSRRQSKGKR----------PK--PKTLHELLERIGLEEHTSTLLLNGYQTLED 283

  Fly   356 VTQVTWEDLEDIGIVKLGHQKKILLAIKRVKDIISGKWNPGGANAYQQQEYQRKP-----WQFNV 415
            ..::....|.::.|:...|:.|:|.|.:.:.|..:.    |...|.:..|..::|     .:..|
Mouse   284 FKELRETHLNELNIMDPQHRAKLLTAAELLLDYDTA----GSEEAEEGAESSQEPVAHTVSEPKV 344

  Fly   416 PIPSTPSYVPTTRVSWDDTKIYATSSVLNSTAPSGS 451
            .||........:....|:.::..|...|...:.||:
Mouse   345 DIPRDSGCFEGSESGRDEAELAGTEEQLQGLSLSGA 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cknNP_611009.1 SAM_caskin1,2_repeat1 254..319 CDD:188896 14/73 (19%)
SAM_caskin1,2_repeat2 320..390 CDD:188897 19/69 (28%)
Caskin-tail <887..912 CDD:465209
Sash3NP_001300678.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..76 8/38 (21%)
SLY 21..174 CDD:463602 36/184 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..168 24/118 (20%)
SH3_SASH3 176..231 CDD:212901 10/70 (14%)
SAM_superfamily 250..317 CDD:472832 20/78 (26%)
Blue background indicates that the domain is not in the aligned region.

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