DRSC/TRiP Functional Genomics Resources

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Protein Alignment ckn and Samsn1

DIOPT Version :10

Sequence 1:NP_611009.1 Gene:ckn / 36673 FlyBaseID:FBgn0033987 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_075869.2 Gene:Samsn1 / 67742 MGIID:1914992 Length:372 Species:Mus musculus


Alignment Length:407 Identity:77/407 - (18%)
Similarity:141/407 - (34%) Gaps:123/407 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 GGFNLPRETSV-----ALRLKDE--VGGTSTAAPTTGGPGGGGATVVGAPPPGAGKPGVAMVPPP 152
            |.|:..|..||     ::.:.|.  ..|:...:.|:...|..|..|                   
Mouse    25 GNFDRFRNNSVSKSDDSIEVHDRELTNGSEEQSKTSSSGGSLGKKV------------------- 70

  Fly   153 PVFCATLREPLTHKAAVYYHQQLALQEDQGIDLTQSPGRDSP---GSSSGSAGSGSRHSTASLDS 214
                ..:...:..|....|.:.|:.::::.......|.|:|.   |:.:......:..|..||.|
Mouse    71 ----RAISWTMKKKVGKKYIKALSEEKEEESGEEALPYRNSDPMIGTHTEKISLKASDSMDSLYS 131

  Fly   215 GRASSYLTGVS--SSGASIR--------APLSSPRCS--------SVSSCSIGSVDRQRNDELII 261
            |::||  :|::  |.|.|.|        :|.|.|.|.        :.|.....|:..::.|  ||
Mouse   132 GQSSS--SGITSCSDGTSNRDSFRLDDDSPYSGPFCGRAKVHTDFTPSPYDTDSLKIKKGD--II 192

  Fly   262 D---------W--LLEMKHEEYAQLFIAAGYDLPTIARMTPEDLTAIGIKNPHHRERIKQRIDKL 315
            |         |  :|..|...:..:::..         :..|:.....||.|..|.|...:    
Mouse   193 DIICKTPMGMWTGMLNNKVGNFKFIYVDV---------ILEEEAAPKKIKVPRSRRRENHQ---- 244

  Fly   316 QVLDNLPHFVPGSIEEWLQLLRLEEYIQPLLEQNYKTVRDVTQVTWEDLEDIGIVKLGHQKKILL 380
                        :|:|:|:.:.|:||...||...|:|:.|:..:....|.::.|.....:.::|.
Mouse   245 ------------TIQEFLERIHLQEYTSTLLLNGYETLDDLKDIKESHLIELNIADPEDRARLLS 297

  Fly   381 AIKRVKDIISGKWNPGGANAYQQQEYQRKPWQFNVPIPSTPSYVPTTRVSWDDTKIYATSSVLNS 445
            |.:.:.|            .....|::::    :||:.|.|..:..:::               .
Mouse   298 AAESLLD------------EETTVEHEKE----SVPLSSNPDILSASQL---------------E 331

  Fly   446 TAPSGSSCLNSSLANGD 462
            ..|..|.|..|| .|.|
Mouse   332 DCPRDSGCYISS-ENSD 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cknNP_611009.1 SAM_caskin1,2_repeat1 254..319 CDD:188896 13/75 (17%)
SAM_caskin1,2_repeat2 320..390 CDD:188897 16/69 (23%)
Caskin-tail <887..912 CDD:465209
Samsn1NP_075869.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71 11/68 (16%)
SLY 17..164 CDD:463602 32/163 (20%)
Important for interaction with 14-3-3 proteins 20..25 77/407 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..111 3/20 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 129..153 10/25 (40%)
SH3 167..218 CDD:473055 9/52 (17%)
SAM_SAMSN1 239..304 CDD:188960 16/80 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..372 13/76 (17%)
Blue background indicates that the domain is not in the aligned region.

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