DRSC/TRiP Functional Genomics Resources

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Protein Alignment ckn and ostf1

DIOPT Version :10

Sequence 1:NP_611009.1 Gene:ckn / 36673 FlyBaseID:FBgn0033987 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_998022.1 Gene:ostf1 / 405783 ZFINID:ZDB-GENE-040625-157 Length:214 Species:Danio rerio


Alignment Length:151 Identity:33/151 - (21%)
Similarity:52/151 - (34%) Gaps:36/151 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 PPPGAGKPGVAMVPPPPVFCATLREPLTHKAAVYYHQQLALQEDQGIDLTQSPGRDS---PGSSS 198
            |||...|||...| ...:|....|.|    ..:|:        ::|..|..|...||   .|:..
Zfish     4 PPPKPAKPGQVKV-YRALFTFDPRTP----DELYF--------EEGDILYISDTSDSNWWKGTCR 55

  Fly   199 GSAGSGSRHSTASLDSGRASSYLTGVSSS------GASIRAPLSSPRCSSVSSCSIGSVDRQRND 257
            |..|.            ..|:|:...:.|      .|:.|..||..|....:...|..:|:..|.
Zfish    56 GRTGL------------IPSNYVAEQAESIDNPMHEAAKRGNLSWLRECLDNKVGINGLDKAGNT 108

  Fly   258 ELIIDWLLEMKHEEYAQLFIA 278
            .|.  |.....|::..::.::
Zfish   109 SLY--WACHGGHKDVVEILLS 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cknNP_611009.1 SAM_caskin1,2_repeat1 254..319 CDD:188896 4/25 (16%)
SAM_caskin1,2_repeat2 320..390 CDD:188897
Caskin-tail <887..912 CDD:465209
ostf1NP_998022.1 SH3_OSTF1 16..68 CDD:212706 15/76 (20%)
ANKYR <66..212 CDD:440430 12/64 (19%)
ANK 1 72..101 7/28 (25%)
ANK repeat 76..103 CDD:293786 6/26 (23%)
ANK repeat 105..137 CDD:293786 4/25 (16%)
ANK 2 105..135 4/25 (16%)
ANK repeat 139..170 CDD:293786
ANK 3 139..168
Blue background indicates that the domain is not in the aligned region.

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