DRSC/TRiP Functional Genomics Resources

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Protein Alignment ckn and SAMD5

DIOPT Version :9

Sequence 1:NP_611009.1 Gene:ckn / 36673 FlyBaseID:FBgn0033987 Length:924 Species:Drosophila melanogaster
Sequence 2:XP_016866339.1 Gene:SAMD5 / 389432 HGNCID:21180 Length:189 Species:Homo sapiens


Alignment Length:101 Identity:28/101 - (27%)
Similarity:50/101 - (49%) Gaps:13/101 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 IEEWLQLLRLEEYIQPLLEQNYKTVRDVTQVTWEDLEDIGIVKLGHQKKILLAIKRVKDIISGKW 393
            :.|||:.|:|.:|.:..::..|..:....|:...||:.||::...|:::||.|::|:::     .
Human     6 VYEWLKALQLPQYAESFVDNGYDDLEVCKQIGDPDLDAIGVLAPAHRRRILEAVRRLRE-----Q 65

  Fly   394 NPGGANAYQQQEYQRKPWQFNVPIPSTPS-YVPTTR 428
            :...|..|...|.|..|       |..|: .|||.|
Human    66 DANAAGLYFTLEPQPAP-------PGPPADAVPTGR 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cknNP_611009.1 SAM_caskin1,2_repeat1 254..319 CDD:188896
SAM 260..316 CDD:197735
SAM_caskin1,2_repeat2 320..390 CDD:188897 17/60 (28%)
SAM 326..387 CDD:197735 17/57 (30%)
Caskin-tail <887..912 CDD:293238
SAMD5XP_016866339.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4384
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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