DRSC/TRiP Functional Genomics Resources

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Protein Alignment ckn and C46H3.2

DIOPT Version :10

Sequence 1:NP_611009.1 Gene:ckn / 36673 FlyBaseID:FBgn0033987 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_001317737.1 Gene:C46H3.2 / 3564865 WormBaseID:WBGene00016725 Length:920 Species:Caenorhabditis elegans


Alignment Length:13 Identity:5/13 - (38%)
Similarity:6/13 - (46%) Gaps:0/13 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 IDRNGDVCISILH 95
            :.|.|..|...||
 Worm    98 VGREGKPCSKQLH 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cknNP_611009.1 SAM_caskin1,2_repeat1 254..319 CDD:188896
SAM_caskin1,2_repeat2 320..390 CDD:188897
Caskin-tail <887..912 CDD:465209
C46H3.2NP_001317737.1 ANKYR 24..259 CDD:440430 5/13 (38%)
ANK repeat 29..61 CDD:293786
ANK repeat 63..94 CDD:293786
ANK repeat 96..127 CDD:293786 5/13 (38%)
ANK repeat 129..153 CDD:293786
ANK repeat 165..197 CDD:293786
ANK repeat 199..229 CDD:293786
SH3 266..321 CDD:214620
SAM_caskin1,2_repeat1 539..604 CDD:188896
SAM_caskin1,2_repeat2 606..676 CDD:188897
Blue background indicates that the domain is not in the aligned region.

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