DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ckn and caskin1

DIOPT Version :9

Sequence 1:NP_611009.1 Gene:ckn / 36673 FlyBaseID:FBgn0033987 Length:924 Species:Drosophila melanogaster
Sequence 2:XP_031748771.1 Gene:caskin1 / 100493921 XenbaseID:XB-GENE-492082 Length:1487 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cknNP_611009.1 SAM_caskin1,2_repeat1 254..319 CDD:188896
SAM 260..316 CDD:197735
SAM_caskin1,2_repeat2 320..390 CDD:188897
SAM 326..387 CDD:197735
Caskin-tail <887..912 CDD:293238
caskin1XP_031748771.1 Ank_4 7..69 CDD:372654
ANK repeat 7..46 CDD:293786
PHA02874 <40..292 CDD:165205
ANK repeat 48..79 CDD:293786
ANK repeat 81..112 CDD:293786
ANK repeat 114..145 CDD:293786
Ank_2 119..218 CDD:403870
ANK repeat 147..186 CDD:293786
ANK repeat 188..219 CDD:293786
ANK repeat 221..251 CDD:293786
SH3_Caskin1 284..345 CDD:212995
Caskin1-CID 428..485 CDD:406899
SAM_caskin1,2_repeat1 531..596 CDD:188896
SAM_caskin1,2_repeat2 597..667 CDD:188897
PTZ00449 <742..>887 CDD:185628
Caskin-Pro-rich 947..1015 CDD:407141
Caskin-tail 1427..1487 CDD:406925
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I9482
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002692
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.