DRSC/TRiP Functional Genomics Resources

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Protein Alignment ckn and LOC100334642

DIOPT Version :10

Sequence 1:NP_611009.1 Gene:ckn / 36673 FlyBaseID:FBgn0033987 Length:924 Species:Drosophila melanogaster
Sequence 2:XP_073801311.1 Gene:LOC100334642 / 100334642 -ID:- Length:1285 Species:Danio rerio


Alignment Length:1085 Identity:235/1085 - (21%)
Similarity:370/1085 - (34%) Gaps:370/1085 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 HHQHPNHH-----HPHHQPSIPL---------YRLSGPLRH----HQNH-QADDGISMSGSSIVS 88
            |...|:|.     .|...||:.|         |.|..|..|    |.|. .::.|...|..|...
Zfish   356 HASLPSHRQQLFSRPALSPSLSLSGAPQTDDSYTLYTPNPHLLLPHANALSSNTGAPPSSLSQHF 420

  Fly    89 SPSLEEGGFNLPRETSVALRLKDEVGGTSTAAPTTGGPGGGGATVVGAPPPGAGKPGVAMVPPPP 153
            :||:|:...   ...|.|...::.||.|.:.. :|...|.|.:|...:.|.||.......:|.  
Zfish   421 TPSMEDVWV---LRNSCAAGDRNSVGSTGSVG-STRSAGSGQSTESNSVPSGAQPHQHPTIPD-- 479

  Fly   154 VFCATLREPLTHKAAVYYHQQLALQEDQGIDLTQSPGRDSPGSSSGSAGSGSRHSTASLDSGRAS 218
                      .:|||           ...:||.|......|.:.:|:.                 
Zfish   480 ----------ANKAA-----------PAAVDLLQPDTNKHPDAPTGAP----------------- 506

  Fly   219 SYLTGVSSSGASIRAPLSSPRCSSVSSCSIGSVDRQ-----RNDELIIDWLLEMKHEEYAQLFIA 278
                         |.|:...:.:.....|...|..|     ::.|.|..||.|.:.|:|...|:.
Zfish   507 -------------RRPVLPTQRAGEQGFSQQFVRPQQLLEGKDAEAIYQWLSEFQLEQYTVNFLN 558

  Fly   279 AGYDLPTIARMTPEDLTAIGIKNPHHRERIKQRIDKLQVLDNLPHFVPGSIEEWLQLLRLEEYIQ 343
            ||||:|||:|||||||||||:..|.||::|...|..|.:.|.||.::|..:.|||..:.|.:|.:
Zfish   559 AGYDVPTISRMTPEDLTAIGVTKPGHRKKISLEIGNLSIPDWLPEYIPQDLGEWLSAIGLPQYHK 623

  Fly   344 PLLEQNYKTVRDVTQVTWEDLEDIGIVKLGHQKKILLAIKRVKDIISGKWNPGGANAYQQQE--- 405
            .|.|..|.::..|..:|||||::|||.|||||||::||:|::.||         ..|..|.|   
Zfish   624 KLSENGYDSINIVRDLTWEDLQEIGITKLGHQKKLMLAVKKLCDI---------HKALLQTESGQ 679

  Fly   406 --YQRK------------PWQ-FNVPIPSTPSYVPTTRVSWDDTKIYATSSVLNSTAPSGSSCLN 455
              .:||            |.: .::|.|.||.     .:::.|:::              |:.|.
Zfish   680 GTLRRKTPAALDLVAIEPPSESCDLPSPHTPK-----MMTFQDSEL--------------STELQ 725

  Fly   456 SSLANGDAYYCTGSNHECCSGNDVVLIKVRQPRGKSLESLEDIHDNSTRSHLTFSHYTTTDYGHF 520
            |:::         |.:..|  .|.:.||.......|.||::.....|.||.              
Zfish   726 SAMS---------SQYSGC--QDGLAIKSAVGMSSSQESIDTRSRGSGRSQ-------------- 765

  Fly   521 GPPTTAAAAAAMAAAA-------------------------------------TLQQQHHHQQLL 548
            .||:|.::.:|..:.:                                     |:..:.:.|.|.
Zfish   766 EPPSTPSSTSAPYSCSRESLTSPDSSPAKERNIPEGRDQGPRPQQLPFSFKYPTITAKPNLQVLN 830

  Fly   549 HQQQQQAAAARLLGNNAPGIGWRRSYDDGDITPTNDATRELLYEQEGGGTLPRQQRGILQRAVLN 613
            :.:.|.::|.  |..::|.:..:|         |...:|..|.:.|     |..:..|....:.|
Zfish   831 YHRAQYSSAT--LDRHSPSVSKKR---------TQSLSRYALSDGE-----PDDEDDIEGAQLAN 879

  Fly   614 -TMPPLEHHHYMNAAAAAEYGAASGVEG------GANYMGGSPLTGKKIAPEPPRRHCSIRNSRT 671
             |||     .|...:.....|..:.::.      |.::........|...|.||:|..|:.:|.|
Zfish   880 VTMP-----SYATLSRKPTRGQLARLQSAPEQSVGRSHSFAIRARRKGPPPPPPKRLSSVSSSST 939

  Fly   672 ---LSGEGVPSGAAAQAHQQAAQQQQGQHMFYGHTAQHWQQQQQQAGAGTGQQPIYANYATIQQT 733
               ...|..|||.........:.....:.:....||:..|:....|..|:.::|       :.::
Zfish   940 SVETVSESPPSGGVENCKSVKSIAAALETVLPVPTAELLQETSTSASEGSKRRP-------LSES 997

  Fly   734 TAEIHCEKYHDSKSTSSID-----------------SIDTIPFANENTGTIKQRLLNRQELQGGG 781
            .::...|....:||.|..|                 |.:.||||.|...|||||           
Zfish   998 ESKPMSEPERATKSDSEEDDGMKDSELESSSSPQNSSSECIPFAEEGNLTIKQR----------- 1051

  Fly   782 AGNNNVPGGGHPAHLHSSSSSSSSSSTNTIANIAHSFHSLKSSSSLHDATLARSESMGSTASGGS 846
                  |..|.|..:.:|:::........:........:||.|.::......:.:...:..||.|
Zfish  1052 ------PKVGGPLKVETSTTTECPEKAKPVKTSDLPEFNLKESDTVKRRQKPKDKEQPNAVSGES 1110

  Fly   847 A-------LHLRSPTLDMS------NAGGSTAEP---------------ASSPEAAVPTV----- 878
            :       :.||....|:|      .|....|.|               ||.|..|.|||     
Zfish  1111 SDVGSQDTMKLRISESDVSLPYVELPAKPVKAPPPLAPKPPSPLSLSRHASQPAPAHPTVVGSSV 1175

  Fly   879 ------AINNGVPP--------------------------------------------------- 886
                  ::....||                                                   
Zfish  1176 TLSVVQSVAFAAPPSPIPYCPSAENTTQGVTSGNVQTPTEGGQGSTLKHQRLEKTSSTLEEALKA 1240

  Fly   887 -------------------KVSVNVLNDIGNMLANLTDELDAMLE 912
                               |.:.|:|:|||||..:|.|:|||||:
Zfish  1241 VERKLTLENNNNVGVSHAVKSAGNILDDIGNMFDDLADQLDAMLD 1285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cknNP_611009.1 SAM_caskin1,2_repeat1 254..319 CDD:188896 33/69 (48%)
SAM_caskin1,2_repeat2 320..390 CDD:188897 32/69 (46%)
Caskin-tail <887..912 CDD:465209 14/24 (58%)
LOC100334642XP_073801311.1 None

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