DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ckn and si:dkeyp-9d4.3

DIOPT Version :9

Sequence 1:NP_611009.1 Gene:ckn / 36673 FlyBaseID:FBgn0033987 Length:924 Species:Drosophila melanogaster
Sequence 2:XP_009304428.1 Gene:si:dkeyp-9d4.3 / 100148061 ZFINID:ZDB-GENE-110914-175 Length:1558 Species:Danio rerio


Alignment Length:1318 Identity:268/1318 - (20%)
Similarity:415/1318 - (31%) Gaps:522/1318 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 STAQAKK--VQPPTI------PGDSPQDLHLYQ------QPQQLHHHHHQHPNHHHP------HH 54
            ||.|..|  ::||.|      .|||.   |::.      .|..|       |..|.|      ::
Zfish   348 STQQYLKIHIRPPAIGSVIMVNGDSS---HIFSLPLTPPPPPAL-------PLTHQPLFTSFGYN 402

  Fly    55 QPSIPLYRLSGPLRHHQNHQADDGISMSGSSIVSSPSL--EEGGFNLPRETSVALRLKDEVGGTS 117
            .|:.............:..|.|.|...|.||...||:|  ::.|.|   |....||.....||:.
Zfish   403 MPTCSTIGFEPASSCSEEPQKDTGSRGSVSSPHGSPTLSGQQSGAN---EEIWVLRKPLAAGGSV 464

  Fly   118 TAAPTTGGPGG----------GGATVVGAPPPGAGKPGVAMVPPPPVFCATLREPLTHKAAVYYH 172
            .:..:||...|          ..|.:..:|.|         ||..|          ||...|..|
Zfish   465 GSMGSTGSLSGRSSASGQSSNANAHLTNSPVP---------VPTTP----------THSPGVNTH 510

  Fly   173 QQLALQEDQGIDLTQSPGRDSPGSSSGSAGSGSRHSTASLDSGRASSYLTGVSSSGASIRAPLSS 237
                             |.:.||..:.:.|. ...:|....|.:|..:|...|.|       :|.
Zfish   511 -----------------GLNVPGLHAQAEGV-KLLATVLSQSAKAKEHLMDQSQS-------VSD 550

  Fly   238 PRCSSVS-SCSIGSVDRQ---------------------RNDELIIDWLLEMKHEEYAQLFIAAG 280
            |..:|.. ..|:.:|.||                     ::.|.:::||...:.:.|...|:.||
Zfish   551 PNSASPQRPQSVSAVPRQQRKKPFVDPLLQRKDEASAESKSSEAVVEWLTSAQLQFYTTNFLTAG 615

  Fly   281 YDLPTIARMTPEDLTAIGIKNPHHRERIKQRIDKLQVLDNLPHFVPGSIEEWLQLLRLEEYIQPL 345
            |||.||:|||||||||||:..|.||:::...|.|:.:.|.:|...|.|:.|||..:.|.:|.|.|
Zfish   616 YDLQTISRMTPEDLTAIGVTKPGHRKKMLSEISKMNIPDWIPQEKPSSLAEWLSAIGLNQYYQTL 680

  Fly   346 LEQNYKTVRDVTQVTWEDLEDIGIVKLGHQKKILLAIKRVK------------------------ 386
            ::..|..:..::.:|.|||::||..|||||||::|||||:.                        
Zfish   681 VQNGYDNMDFISDITLEDLKEIGFTKLGHQKKLMLAIKRLSESPEAESLSKESQLEESTDAKQPL 745

  Fly   387 ------DIIS---------------------------GKWNPGGANAYQQQEYQR--------KP 410
                  |:.|                           |:.:|  .::.|.:..||        ||
Zfish   746 ETSTEPDVNSVPSARIRKRAEGRSEGRPEGRPDGRSEGRSSP--RHSTQGRGIQRANAPPPLKKP 808

  Fly   411 WQFNVPIPSTPSYVPT---TRVSWDDTKIYATSSVLNSTAPSGSSCLNSSLANGDA----YYCTG 468
            ...:.|.| ||.:.||   |..|..::..:..||.|.:.:.....| :|..::..|    ..|..
Zfish   809 SSIDSPTP-TPPHTPTKGRTSSSSSNSPSHIPSSPLKTQSRPRGPC-DSPRSHAHARTVPVLCLP 871

  Fly   469 SNHECCSGNDVVLIKVRQPRGKSLESLEDI--HDNSTR-----SHLTFSHYTTTDYGH------- 519
            ...|....|.....:.|  ||:|:.:..|:  .|:|.:     .|.|.|..:|...|.       
Zfish   872 HEGETEESNGQTPSQPR--RGQSINTDADLPMPDSSVKYATLGGHKTTSSSSTRTSGESLDINSV 934

  Fly   520 -----FG---------PPTTAAAAA-----------AMAAAATLQQQHHHQQLL---HQQQQQA- 555
                 |.         |||....:.           |:|..|.|.:...:..||   ::::::: 
Zfish   935 NRSQSFATARPRRRTRPPTPPKRSCSSISTGNLTDEAVADDARLSENRANNLLLNVTYRERRRSD 999

  Fly   556 ----------------AAARL----LGNNAPGIG------------------------------- 569
                            .||.|    |||:..|.|                               
Zfish  1000 CGIASEKTSSGGSVRDIAAMLEMSNLGNSGKGSGSGYTQVSQNVLRQNREVLNLDADSRRRTISE 1064

  Fly   570 ----WRRSYDDGDITPTNDAT--------------------RELLYEQEGG-GTLPRQQRGILQR 609
                .::|.|..:.....|..                    |.::...||| .:||:::...:..
Zfish  1065 FYDSQKQSADVQEAEMRQDTAHHKPEPRETHLLKQAPEPRPRSMITHLEGGVSSLPQEEWSRMDA 1129

  Fly   610 AVLNTMPPLEHH----HY-----------MNAAAAAEYGAASGVEGGANYM-----------GG- 647
            ......|...||    |:           ..|.|..:.....| :|..|:.           || 
Zfish  1130 TATLRRPRPPHHTDGEHFNLTETSTIKRRPKALAQPQSNGTDG-DGPENFRRRPVSEACVGDGGR 1193

  Fly   648 --------------------------------------------------SPLTGKKI------A 656
                                                              ||:..:||      .
Zfish  1194 DEELHHDGFGSLPRQILKPPVSPKPAMALRKFDPPTPTRRVPLPGPEGQHSPVEVRKIPPPVSPK 1258

  Fly   657 PEPP---RRHCSIRNSRTLSGEGVP-----------------------------------SGAAA 683
            |.||   .:...|:...|:...|.|                                   .|:..
Zfish  1259 PSPPPTLPKPVKIKPIHTIGTPGSPQPDVVSPFSASFSPVSIEQLEHPPQTLSPVTPKPMEGSML 1323

  Fly   684 QAHQQAAQQQQGQHMFYGHTAQHWQQQQQQAGAGTGQQPIYANYATIQQTTAEI----------- 737
            ......:..|..|      |.|..|..|..:..|:|..|:....:::...:.:|           
Zfish  1324 SPRPATSPAQSPQ------TPQTPQTPQTPSTPGSGSAPVKPPRSSMAGLSVDIPSPLEVDVPGL 1382

  Fly   738 -------HCEKYHDSKSTSSIDSIDTIPFAN-ENTGTIKQRLLNRQELQGGGAGNNNVPGGGHPA 794
                   ..:|..:.......:.:|.:.||. |.||.|:...|.:.| ||               
Zfish  1383 DVQKRLRESDKQREDDDMRKQERVDEVGFAKMERTGLIQLDPLFQGE-QG--------------- 1431

  Fly   795 HLHSSSSSSSSSSTNTIANIAHSFHSLKSSSSLHDATLAR---------------SESMGSTASG 844
             |.|.||..|              |.:::........:.|               .|..|.|...
Zfish  1432 -LISGSSVGS--------------HLIEAGDGAGPVVMRRRKVGVARQTQVEGESQEGEGKTEME 1481

  Fly   845 GSALHLRSPTLDMSNAGGSTA---------EPASSPEAAVPTVA------INNGVPPKVSVNVLN 894
            |..|      |.::..|||:.         |.::|..||:..|.      .::.|..|.:||:|:
Zfish  1482 GQGL------LKIAETGGSSCGDVMQLRLDETSASLAAALEVVEEKIKKDDSSTVDNKSTVNILD 1540

  Fly   895 DIGNMLANLTDELDAMLE 912
            |||:|..:|.|:|||||:
Zfish  1541 DIGSMFDDLADQLDAMLD 1558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cknNP_611009.1 SAM_caskin1,2_repeat1 254..319 CDD:188896 29/85 (34%)
SAM 260..316 CDD:197735 27/55 (49%)
SAM_caskin1,2_repeat2 320..390 CDD:188897 30/99 (30%)
SAM 326..387 CDD:197735 28/90 (31%)
Caskin-tail <887..912 CDD:293238 14/24 (58%)
si:dkeyp-9d4.3XP_009304428.1 Ank_4 7..69 CDD:290365
ANK repeat 7..46 CDD:293786
ANK 43..168 CDD:238125
ANK repeat 48..79 CDD:293786
Ank_2 53..145 CDD:289560
ANK repeat 81..112 CDD:293786
ANK 109..238 CDD:238125
ANK repeat 114..145 CDD:293786
Ank_2 119..215 CDD:289560
ANK repeat 148..183 CDD:293786
ANK repeat 185..216 CDD:293786
Ank_5 205..258 CDD:290568
ANK repeat 218..248 CDD:293786
SH3 281..342 CDD:302595
Caskin1-CID 449..533 CDD:293208 23/120 (19%)
SAM 587..650 CDD:197735 27/62 (44%)
SAM_caskin1,2_repeat1 590..654 CDD:188896 28/63 (44%)
SAM_caskin1,2_repeat2 655..722 CDD:188897 29/66 (44%)
SAM 661..723 CDD:197735 28/61 (46%)
Caskin-tail 1501..1558 CDD:293238 20/56 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 71 1.000 Domainoid score I9374
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002692
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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