DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lap1 and RLP12

DIOPT Version :9

Sequence 1:NP_001188938.1 Gene:Lap1 / 36670 FlyBaseID:FBgn0033984 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_177296.2 Gene:RLP12 / 843481 AraportID:AT1G71400 Length:847 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lap1NP_001188938.1 LRR_RI <21..200 CDD:238064
leucine-rich repeat 21..41 CDD:275380
LRR_8 40..98 CDD:290566
leucine-rich repeat 42..64 CDD:275380
leucine-rich repeat 65..87 CDD:275380
LRR_8 86..140 CDD:290566
leucine-rich repeat 88..110 CDD:275380
leucine-rich repeat 111..133 CDD:275380
leucine-rich repeat 134..156 CDD:275380
LRR_8 156..213 CDD:290566
leucine-rich repeat 157..179 CDD:275380
leucine-rich repeat 180..202 CDD:275380
leucine-rich repeat 203..225 CDD:275380
leucine-rich repeat 226..248 CDD:275380
leucine-rich repeat 272..294 CDD:275380
LRR_8 279..328 CDD:290566
leucine-rich repeat 295..317 CDD:275380
leucine-rich repeat 318..340 CDD:275380
LRR_8 340..396 CDD:290566
leucine-rich repeat 364..386 CDD:275380
PDZ_signaling 770..846 CDD:238492
RLP12NP_177296.2 LRRNT_2 36..80 CDD:285463
LRR_8 112..170 CDD:290566
leucine-rich repeat 112..135 CDD:275380
leucine-rich repeat 136..159 CDD:275380
LRR_8 159..218 CDD:290566
leucine-rich repeat 160..183 CDD:275380
leucine-rich repeat 184..207 CDD:275380
LRR_RI 198..479 CDD:238064
LRR_8 206..266 CDD:290566
leucine-rich repeat 208..231 CDD:275380
leucine-rich repeat 232..255 CDD:275380
leucine-rich repeat 256..279 CDD:275380
leucine-rich repeat 280..352 CDD:275380
leucine-rich repeat 304..322 CDD:275380
LRR_8 351..411 CDD:290566
leucine-rich repeat 353..376 CDD:275380
LRR_RI 374..601 CDD:238064
leucine-rich repeat 377..400 CDD:275380
leucine-rich repeat 401..422 CDD:275380
leucine-rich repeat 445..468 CDD:275380
leucine-rich repeat 469..493 CDD:275380
leucine-rich repeat 494..517 CDD:275380
LRR_8 516..576 CDD:290566
leucine-rich repeat 518..541 CDD:275380
leucine-rich repeat 542..565 CDD:275380
leucine-rich repeat 592..616 CDD:275380
leucine-rich repeat 617..683 CDD:275380
LRR_8 682..742 CDD:290566
LRR_4 682..719 CDD:289563
leucine-rich repeat 684..707 CDD:275380
leucine-rich repeat 708..729 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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