DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lap1 and AT3G28040

DIOPT Version :9

Sequence 1:NP_001188938.1 Gene:Lap1 / 36670 FlyBaseID:FBgn0033984 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_189443.2 Gene:AT3G28040 / 822428 AraportID:AT3G28040 Length:1016 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lap1NP_001188938.1 LRR_RI <21..200 CDD:238064
leucine-rich repeat 21..41 CDD:275380
LRR_8 40..98 CDD:290566
leucine-rich repeat 42..64 CDD:275380
leucine-rich repeat 65..87 CDD:275380
LRR_8 86..140 CDD:290566
leucine-rich repeat 88..110 CDD:275380
leucine-rich repeat 111..133 CDD:275380
leucine-rich repeat 134..156 CDD:275380
LRR_8 156..213 CDD:290566
leucine-rich repeat 157..179 CDD:275380
leucine-rich repeat 180..202 CDD:275380
leucine-rich repeat 203..225 CDD:275380
leucine-rich repeat 226..248 CDD:275380
leucine-rich repeat 272..294 CDD:275380
LRR_8 279..328 CDD:290566
leucine-rich repeat 295..317 CDD:275380
leucine-rich repeat 318..340 CDD:275380
LRR_8 340..396 CDD:290566
leucine-rich repeat 364..386 CDD:275380
PDZ_signaling 770..846 CDD:238492
AT3G28040NP_189443.2 LRRNT_2 33..73 CDD:285463
PLN00113 40..1002 CDD:215061
leucine-rich repeat 79..102 CDD:275380
LRR_RI 81..380 CDD:238064
leucine-rich repeat 103..125 CDD:275380
leucine-rich repeat 126..149 CDD:275380
leucine-rich repeat 150..174 CDD:275380
leucine-rich repeat 175..198 CDD:275380
leucine-rich repeat 199..224 CDD:275380
leucine-rich repeat 225..248 CDD:275380
leucine-rich repeat 249..272 CDD:275380
leucine-rich repeat 273..296 CDD:275380
leucine-rich repeat 297..320 CDD:275380
leucine-rich repeat 321..344 CDD:275380
leucine-rich repeat 345..366 CDD:275380
leucine-rich repeat 369..390 CDD:275380
leucine-rich repeat 392..416 CDD:275380
leucine-rich repeat 417..440 CDD:275380
leucine-rich repeat 441..464 CDD:275380
leucine-rich repeat 465..488 CDD:275380
leucine-rich repeat 489..534 CDD:275380
leucine-rich repeat 537..560 CDD:275380
leucine-rich repeat 561..584 CDD:275380
STKc_IRAK 732..1002 CDD:270968
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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