DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lap1 and PIRL5

DIOPT Version :9

Sequence 1:NP_001188938.1 Gene:Lap1 / 36670 FlyBaseID:FBgn0033984 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_179336.1 Gene:PIRL5 / 816250 AraportID:AT2G17440 Length:526 Species:Arabidopsis thaliana


Alignment Length:293 Identity:99/293 - (33%)
Similarity:163/293 - (55%) Gaps:2/293 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 QGLRVLHVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDA 127
            |.|.:.|...:.||.:|.::|.|..|..|||:.|.|:.:|..|.....||.|||..|.:.:||::
plant   207 QELNLQHRLMDQLEWLPDSLGKLSSLVRLDLSENCIMVLPATIGGLISLTRLDLHSNRIGQLPES 271

  Fly   128 ITSLISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTE 192
            |..|::|..|.|:...|..||::|.||::|..|:|..|:|..||:|:..|::|::||:..|...|
plant   272 IGDLLNLVNLNLSGNQLSSLPSSFNRLIHLEELDLSSNSLSILPESIGSLVSLKKLDVETNNIEE 336

  Fly   193 LPEVVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSN 257
            :|..:....|:.||..|:|:::.:...:|||..|:......|.:..||:.:|:..|::.|.:..|
plant   337 IPHSISGCSSMEELRADYNRLKALPEAVGKLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFN 401

  Fly   258 SLEAFPFSVGMLKSLVTFKCESN--GLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRF 320
            .||:.|.|:...|:||.....:|  .|..||..|..||:||||.:|:|::..||.:...|.:||.
plant   402 ELESVPESLCYAKTLVKLNIGNNFANLRSLPGLIGNLEKLEELDMSNNQIRFLPYSFKTLSNLRV 466

  Fly   321 LFADDNQLRQLPDELCSCQQLSVLSVANNQLSA 353
            |..:.|.|.:||.::......:|:...|:.:.|
plant   467 LQTEQNPLEELPRDITEKGAQAVVQYMNDLVEA 499

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Lap1NP_001188938.1 LRR_RI <21..200 CDD:238064 50/136 (37%)
leucine-rich repeat 21..41 CDD:275380
LRR_8 40..98 CDD:290566 13/34 (38%)