DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lap1 and si:ch211-106h11.1

DIOPT Version :9

Sequence 1:NP_001188938.1 Gene:Lap1 / 36670 FlyBaseID:FBgn0033984 Length:849 Species:Drosophila melanogaster
Sequence 2:XP_009297371.2 Gene:si:ch211-106h11.1 / 559987 ZFINID:ZDB-GENE-061009-2 Length:857 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lap1NP_001188938.1 LRR_RI <21..200 CDD:238064
leucine-rich repeat 21..41 CDD:275380
LRR_8 40..98 CDD:290566
leucine-rich repeat 42..64 CDD:275380
leucine-rich repeat 65..87 CDD:275380
LRR_8 86..140 CDD:290566
leucine-rich repeat 88..110 CDD:275380
leucine-rich repeat 111..133 CDD:275380
leucine-rich repeat 134..156 CDD:275380
LRR_8 156..213 CDD:290566
leucine-rich repeat 157..179 CDD:275380
leucine-rich repeat 180..202 CDD:275380
leucine-rich repeat 203..225 CDD:275380
leucine-rich repeat 226..248 CDD:275380
leucine-rich repeat 272..294 CDD:275380
LRR_8 279..328 CDD:290566
leucine-rich repeat 295..317 CDD:275380
leucine-rich repeat 318..340 CDD:275380
LRR_8 340..396 CDD:290566
leucine-rich repeat 364..386 CDD:275380
PDZ_signaling 770..846 CDD:238492
si:ch211-106h11.1XP_009297371.2 Pannexin_like 1..361 CDD:315247
NEL <452..>655 CDD:330839
leucine-rich repeat 492..515 CDD:275380
leucine-rich repeat 516..538 CDD:275380
leucine-rich repeat 539..568 CDD:275380
leucine-rich repeat 569..591 CDD:275380
LRR 575..>831 CDD:227223
leucine-rich repeat 592..612 CDD:275380
leucine-rich repeat 616..638 CDD:275380
leucine-rich repeat 639..663 CDD:275380
leucine-rich repeat 664..686 CDD:275380
leucine-rich repeat 687..732 CDD:275380
leucine-rich repeat 733..756 CDD:275380
leucine-rich repeat 757..779 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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