DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lap1 and Sur-8

DIOPT Version :9

Sequence 1:NP_001188938.1 Gene:Lap1 / 36670 FlyBaseID:FBgn0033984 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lap1NP_001188938.1 LRR_RI <21..200 CDD:238064
leucine-rich repeat 21..41 CDD:275380
LRR_8 40..98 CDD:290566
leucine-rich repeat 42..64 CDD:275380
leucine-rich repeat 65..87 CDD:275380
LRR_8 86..140 CDD:290566
leucine-rich repeat 88..110 CDD:275380
leucine-rich repeat 111..133 CDD:275380
leucine-rich repeat 134..156 CDD:275380
LRR_8 156..213 CDD:290566
leucine-rich repeat 157..179 CDD:275380
leucine-rich repeat 180..202 CDD:275380
leucine-rich repeat 203..225 CDD:275380
leucine-rich repeat 226..248 CDD:275380
leucine-rich repeat 272..294 CDD:275380
LRR_8 279..328 CDD:290566
leucine-rich repeat 295..317 CDD:275380
leucine-rich repeat 318..340 CDD:275380
LRR_8 340..396 CDD:290566
leucine-rich repeat 364..386 CDD:275380
PDZ_signaling 770..846 CDD:238492
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380
leucine-rich repeat 185..207 CDD:275380
LRR_RI 204..401 CDD:238064
LRR_8 207..264 CDD:290566
leucine-rich repeat 208..230 CDD:275380
leucine-rich repeat 231..253 CDD:275380
LRR_8 252..310 CDD:290566
leucine-rich repeat 254..276 CDD:275380
leucine-rich repeat 277..299 CDD:275380
LRR_8 299..356 CDD:290566
leucine-rich repeat 300..322 CDD:275380
leucine-rich repeat 323..345 CDD:275380
LRR_8 344..403 CDD:290566
leucine-rich repeat 346..368 CDD:275380
leucine-rich repeat 369..392 CDD:275380
LRR_RI <379..566 CDD:238064
leucine-rich repeat 417..440 CDD:275380
leucine-rich repeat 441..486 CDD:275380
LRR_8 463..520 CDD:290566
leucine-rich repeat 487..507 CDD:275380
leucine-rich repeat 510..532 CDD:275380
LRR_8 532..588 CDD:290566
leucine-rich repeat 556..578 CDD:275380
leucine-rich repeat 603..626 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46761
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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