DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lap1 and cyr1

DIOPT Version :10

Sequence 1:NP_611007.1 Gene:Lap1 / 36670 FlyBaseID:FBgn0033984 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_596159.1 Gene:cyr1 / 2540810 PomBaseID:SPBC19C7.03 Length:1692 Species:Schizosaccharomyces pombe


Alignment Length:560 Identity:131/560 - (23%)
Similarity:215/560 - (38%) Gaps:138/560 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CFKFKREEVIDKLDYSNT-------PLTDFP--EVWQHER-----------------TLEELYLS 48
            |.|.||      ||.||.       |:|...  ||....|                 :|:||.::
pombe   452 CVKLKR------LDISNNLRSPRGKPITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIA 510

  Fly    49 TTRLQALPPQLFYCQGLRVLHVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTH 113
            ..:|..||....|...|..|.::.||..:.|..|..|.||:.|:.:.||:..:..:|.|...|.|
pombe   511 NNKLFFLPHSTRYLVNLTYLDLSYNNFVTFPLIITELSQLETLNFSHNLLSQISSKIGSLVKLKH 575

  Fly   114 LDLSCNSL-QRLP----------------DAITSLISLQEL-----------LL--------NET 142
            |.|..|.| .|||                :|||::.||.|.           ||        :.|
pombe   576 LYLQFNDLSNRLPQEIGLLKNLETIDLSYNAITNIASLSECPKLNSINVACNLLSFYEYSNPSAT 640

  Fly   143 YLEFL--------PA-NFGRLVNLRILELRLNNLMTLPKSMVR-LINLQRLDIGGNEFTELPEVV 197
            :::|.        || ::..||...|...:   |:.|..|::. |:|::.:.:..|.||.:.:.:
pombe   641 FIDFSFCPLTTIDPAFSYSNLVYFDISHAK---LIGLKDSVIETLVNVETVKVNYNHFTSISDAI 702

  Fly   198 GELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAF 262
            ..:::|:.|.....::..||.|:|||:.|.|.:.:.|.:...|.|:....:::|:::.||.||..
pombe   703 SAMQNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHANNIKIFPEEVWQVSSLKVVNLSSNILEKI 767

  Fly   263 PFSVGMLKSL--------VTFKCESNGLTELPD------------------------SISYLEQL 295
            ...|...|.|        :......|.::.|..                        ::.|.:.|
pombe   768 KLPVATSKKLTRTISQLKIMRTLSGNPVSSLSSQEFVMPTVEELYLVDNRLGNDCFTALEYFKCL 832

  Fly   296 EELVLSHNKLIRLPSTIGM-LRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIG 359
            :.|.||:|.|..:||.... ...|:.||...|:|..|.....:...|..|....|:||:.|:|..
pombe   833 KVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLSISSTAQVLLETLYANGNRLSSFPKNEA 897

  Fly   360 NLSKMKVLNVVNNYINALPVSMLNLVNLTSMWLSDNQSQPLVPLQYLDAS----------TKTQL 414
            ....::.|::..|.:..|.|......:||.          |..|:||:.|          ..|..
pombe   898 LSKSLRFLDISTNNLQNLAVEKAEKKSLTK----------LPQLEYLNLSGNTWFRFSEHEDTNF 952

  Fly   415 TCFMLPQVTF----KMNSIQAQQQAQEQYEFVYANQQQPH 450
            |...|..:.|    .:|:..:...:.....|:..|..||:
pombe   953 TKSYLKNLKFLSIMDLNTKFSNAPSDVLNHFIQRNSPQPN 992

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lap1NP_611007.1 LRR 12..407 CDD:443914 119/499 (24%)
leucine-rich repeat 21..41 CDD:275380 9/45 (20%)
leucine-rich repeat 42..64 CDD:275380 7/21 (33%)
leucine-rich repeat 65..87 CDD:275380 7/21 (33%)
leucine-rich repeat 88..110 CDD:275380 6/21 (29%)
leucine-rich repeat 111..133 CDD:275380 12/38 (32%)
leucine-rich repeat 134..156 CDD:275380 9/49 (18%)
leucine-rich repeat 157..179 CDD:275380 5/22 (23%)
leucine-rich repeat 180..202 CDD:275380 3/21 (14%)
leucine-rich repeat 203..225 CDD:275380 8/21 (38%)
leucine-rich repeat 226..248 CDD:275380 5/21 (24%)
leucine-rich repeat 272..294 CDD:275380 4/53 (8%)
leucine-rich repeat 295..317 CDD:275380 8/22 (36%)
leucine-rich repeat 318..340 CDD:275380 6/21 (29%)
leucine-rich repeat 364..386 CDD:275380 4/21 (19%)
PDZ_canonical 778..846 CDD:467153
cyr1NP_596159.1 Ad_cyc_g-alpha 155..200 CDD:129025
RA_CYR1_like 294..391 CDD:340734
leucine-rich repeat 409..430 CDD:275380
LRR 430..>711 CDD:443914 67/267 (25%)
leucine-rich repeat 431..454 CDD:275380 1/1 (100%)
leucine-rich repeat 455..477 CDD:275380 8/27 (30%)
leucine-rich repeat 478..503 CDD:275380 3/24 (13%)
leucine-rich repeat 504..526 CDD:275380 7/21 (33%)
leucine-rich repeat 527..549 CDD:275380 7/21 (33%)
leucine-rich repeat 550..572 CDD:275380 6/21 (29%)
leucine-rich repeat 573..596 CDD:275380 9/22 (41%)
LRR 589..990 CDD:443914 86/413 (21%)
leucine-rich repeat 597..618 CDD:275380 6/20 (30%)
leucine-rich repeat 661..684 CDD:275380 7/25 (28%)
leucine-rich repeat 685..707 CDD:275380 3/21 (14%)
leucine-rich repeat 708..730 CDD:275380 8/21 (38%)
leucine-rich repeat 754..783 CDD:275380 8/28 (29%)
leucine-rich repeat 784..807 CDD:275380 2/22 (9%)
leucine-rich repeat 808..831 CDD:275380 1/22 (5%)
leucine-rich repeat 832..855 CDD:275380 8/22 (36%)
leucine-rich repeat 856..877 CDD:275380 6/20 (30%)
leucine-rich repeat 879..901 CDD:275380 7/21 (33%)
leucine-rich repeat 902..930 CDD:275380 7/37 (19%)
PP2C 1032..1268 CDD:395385
Guanylate_cyc 1323..1519 CDD:425528
Blue background indicates that the domain is not in the aligned region.

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