DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lap1 and Lrrc7

DIOPT Version :9

Sequence 1:NP_001188938.1 Gene:Lap1 / 36670 FlyBaseID:FBgn0033984 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_001357710.1 Gene:Lrrc7 / 242274 MGIID:2676665 Length:1575 Species:Mus musculus


Alignment Length:993 Identity:291/993 - (29%)
Similarity:450/993 - (45%) Gaps:245/993 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLSKCFPCFKFK-REEVIDKLDYSNTPLTDFP-EVWQHERTLEELYLSTTRLQALPPQLFYCQGL 65
            |:.:..||..|: .||:|..||||:..|...| ||:..|||||||||...:::.||.|||.||.|
Mouse    45 LIGRLVPCRCFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQAL 109

  Fly    66 RVLHVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITS 130
            |.|.:..|:|.|:|.:|.||..|:.||:::|.:...||.||.||.||.::.|.|.:.:|||..|.
Mouse   110 RKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 174

  Fly   131 LISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELPE 195
            |::|.:|.||:.:||||||||||||.|||||||.|:|.||||||.:|..|:|||:|.|||:||||
Mouse   175 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE 239

  Fly   196 VVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLE 260
            |:.::::|||||:|.|.::.:..:||||:.|.:.:.:.|.::|:..::|....:|.|.:.||.|:
Mouse   240 VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQ 304

  Fly   261 AFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADD 325
            ..|.|:|:||.|.|.|.:.|.||.||::|..|..|||...|.|:|..||.|||.|.|||.|..|:
Mouse   305 QLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDE 369

  Fly   326 NQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTSM 390
            |.|.:||.|:.||:.::|:|:.:|:|..||:.||.:.:::|||:.:|.:..||.|...|..|.::
Mouse   370 NFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAAL 434

  Fly   391 WLSDNQSQPLVPLQYLDASTKTQ---LTCFMLPQ-----VTFKMNS---------IQAQQQAQEQ 438
            |||||||:.|:||| .:|..:|:   ||.:|.||     ..|:.:|         .|.||:....
Mouse   435 WLSDNQSKALIPLQ-TEAHPETKQRVLTNYMFPQQPRGDEDFQSDSDSFNPTLWEEQRQQRMTVA 498

  Fly   439 YEFVYANQQQPHASPSRRI-----------------------CFAEEATILSNAKAQPAPN---- 476
            :||....:....|...:.:                       |....|......:..|.|.    
Mouse   499 FEFEDKKEDDESAGKVKALSCQAPWDRGQRGITLQPARLSGDCCTPWARCDQQIQDMPVPQSDPQ 563

  Fly   477 ----------------YPSFVAAPPTPTPDQMAG---SVRLMRSPTPYPKELRQMSKYVR----- 517
                            .|..|||..|..| .::|   .:.|.|.|||||::|:.|.|.|:     
Mouse   564 LAWGCISGLQQERSMCAPLPVAAQSTTLP-SLSGRQVEINLKRYPTPYPEDLKNMVKSVQNLVGK 627

  Fly   518 -----QAQAATSSANASE-----------------------VREARVVTNGQI------------ 542
                 :.:.:..:||..:                       |..|..:..|::            
Mouse   628 PSHGVRVENSNPTANTEQTVKEKFEHKWPVAPKEITVEDSFVHPANEMRIGELHPSLAETPLYPP 692

  Fly   543 ---------------------HCDSNNANQDVV-----DQATTS---------AIYGIAPETTH- 571
                                 ||.:|:.:....     .||:::         ::...|.:..| 
Mouse   693 KLVLLGKDKKESTDESEVDKTHCLNNSVSSGTYSDYSPSQASSASSNTRMKVGSLQATAKDAVHN 757

  Fly   572 -IYGVYQQPQQMAHPVPTQEYYGLPLVNYE----------------------------AHYQQ-- 605
             ::|     .::|.|.| |.....||::..                            :||..  
Mouse   758 SLWG-----NRIAPPFP-QPLDAKPLLSQREAVPPGNIPQRPDRLPMSDAFPDNWTDGSHYDNTG 816

  Fly   606 -LYVEA------NTPLPTTHLNGDQDYELQPLQQQ------PM---QQQALPTPRLEPPPYHIAR 654
             :..||      |.||.::.......:..:||.:|      |:   |.....||..|.||.:..:
Mouse   817 FVSEEAAGENANNNPLLSSKARSVPAHGRRPLIRQERIVGVPLELEQSTHRHTPETEVPPSNPWQ 881

  Fly   655 VYTKKTP---EDLNLYES----------MRQRKQQQQLQEQT----------IYQDALNSNSNFK 696
            .:| :||   ||...:.|          :.:||...:...:|          .|.|...:.|...
Mouse   882 NWT-RTPSPFEDRTAFPSKLETTPTTSPLPERKDHMKEPTETPGPFSPGVPWEYHDPTPNRSLGN 945

  Fly   697 T---------TAIGAQDVEESVDQLDYQNNISNNLEPNPEEEDQELD--DTMSQHSLNSTATNNT 750
            .         ::.|...:.:|.::|   :.:..:::.|..::.|.:|  |..:....|....|..
Mouse   946 VFSQIHCRPDSSKGVIAISKSTERL---SPLMKDIKSNKFKKSQSIDEIDVGTYKVYNIPLENYA 1007

  Fly   751 SKASHKKSTWIFGVHKNP 768
            |.:.|      .|.|:.|
Mouse  1008 SGSDH------LGSHERP 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lap1NP_001188938.1 LRR_RI <21..200 CDD:238064 98/179 (55%)
leucine-rich repeat 21..41 CDD:275380 9/20 (45%)
LRR_8 40..98 CDD:290566 29/57 (51%)
leucine-rich repeat 42..64 CDD:275380 12/21 (57%)
leucine-rich repeat 65..87 CDD:275380 10/21 (48%)
LRR_8 86..140 CDD:290566 21/53 (40%)
leucine-rich repeat 88..110 CDD:275380 9/21 (43%)
leucine-rich repeat 111..133 CDD:275380 9/21 (43%)
leucine-rich repeat 134..156 CDD:275380 15/21 (71%)
LRR_8 156..213 CDD:290566 36/56 (64%)
leucine-rich repeat 157..179 CDD:275380 16/21 (76%)
leucine-rich repeat 180..202 CDD:275380 13/21 (62%)
leucine-rich repeat 203..225 CDD:275380 11/21 (52%)
leucine-rich repeat 226..248 CDD:275380 4/21 (19%)
leucine-rich repeat 272..294 CDD:275380 10/21 (48%)
LRR_8 279..328 CDD:290566 25/48 (52%)
leucine-rich repeat 295..317 CDD:275380 12/21 (57%)
leucine-rich repeat 318..340 CDD:275380 11/21 (52%)
LRR_8 340..396 CDD:290566 21/55 (38%)
leucine-rich repeat 364..386 CDD:275380 8/21 (38%)
PDZ_signaling 770..846 CDD:238492
Lrrc7NP_001357710.1 leucine-rich repeat 64..85 CDD:275380 9/20 (45%)
LRR_8 85..140 CDD:338972 27/54 (50%)
leucine-rich repeat 86..108 CDD:275380 12/21 (57%)
leucine-rich repeat 109..131 CDD:275380 10/21 (48%)
LRR 130..440 CDD:227223 144/309 (47%)
leucine-rich repeat 132..177 CDD:275380 19/44 (43%)
leucine-rich repeat 178..200 CDD:275380 15/21 (71%)
leucine-rich repeat 201..223 CDD:275380 16/21 (76%)
leucine-rich repeat 224..246 CDD:275380 13/21 (62%)
leucine-rich repeat 247..269 CDD:275380 11/21 (52%)
leucine-rich repeat 270..292 CDD:275380 4/21 (19%)
leucine-rich repeat 316..336 CDD:275380 9/19 (47%)
leucine-rich repeat 339..361 CDD:275380 12/21 (57%)
leucine-rich repeat 362..384 CDD:275380 11/21 (52%)
leucine-rich repeat 385..407 CDD:275380 8/21 (38%)
leucine-rich repeat 408..430 CDD:275380 8/21 (38%)
PDZ_signaling 1485..1570 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BA7S
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 405 1.000 Inparanoid score I1882
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43202
orthoMCL 1 0.900 - - OOG6_105355
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.720

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