DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agps and CKX4

DIOPT Version :10

Sequence 1:NP_611006.1 Gene:Agps / 36669 FlyBaseID:FBgn0033983 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_194703.1 Gene:CKX4 / 829096 AraportID:AT4G29740 Length:524 Species:Arabidopsis thaliana


Alignment Length:288 Identity:60/288 - (20%)
Similarity:112/288 - (38%) Gaps:54/288 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 SAEGIDRL--VRCHGQTLNDIYSL--WHHKFRRI----PDLVVWPRCHDEVVQLVRLAN---KHN 182
            |.||||..  :..:...|.|.:|:  ..|.|..|    |..|:.|....||.:|:|.||   .:|
plant    26 SDEGIDVFLPISLNLTVLTDPFSISAASHDFGNITDENPGAVLCPSSTTEVARLLRFANGGFSYN 90

  Fly   183 ---------VMLVPFGGGTSVSGAITCPQNESRMICALDTSQMNRLLWLNRENLTVCFESGIVGQ 238
                     ..:...|.|.|:.|..:.|......:..|..:.....:.::.:.......:|.:..
plant    91 KGSTSPASTFKVAARGQGHSLRGQASAPGGVVVNMTCLAMAAKPAAVVISADGTYADVAAGTMWV 155

  Fly   239 DLERVLRSEGLTVGHEPDSYEFSTLGGWVATRASGMKKNVYG----NIEDLVVRVRMVTPSGTLE 299
            |:.:.....|::.....| |.:.::||.::....|.:...:|    |:.:|.|    :|..|.: 
plant   156 DVLKAAVDRGVSPVTWTD-YLYLSVGGTLSNAGIGGQTFRHGPQISNVHELDV----ITGKGEM- 214

  Fly   300 RECSAPRVSCGPDFN----HVILGSEGTLGVITEVVLKVRPLPSLRRYGSLAFPNFEQGVLFMRE 360
                   ::|.|..|    :.:||..|..|:||...:.:...|:..::..:.:.:|.   .|.|:
plant   215 -------MTCSPKLNPELFYGVLGGLGQFGIITRARIALDHAPTRVKWSRILYSDFS---AFKRD 269

  Fly   361 VARRRCQPASVRLMDNE---QFMFGQAL 385
            ..|       :..|.|:   .|:.||.:
plant   270 QER-------LISMTNDLGVDFLEGQLM 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AgpsNP_611006.1 GlcD 155..610 CDD:440046 51/258 (20%)
CKX4NP_194703.1 PLN02441 3..524 CDD:215242 60/288 (21%)

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