DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ADPS and d2hgdh

DIOPT Version :9

Sequence 1:NP_001188935.1 Gene:ADPS / 36669 FlyBaseID:FBgn0033983 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_001074066.1 Gene:d2hgdh / 565889 ZFINID:ZDB-GENE-070112-482 Length:533 Species:Danio rerio


Alignment Length:510 Identity:113/510 - (22%)
Similarity:197/510 - (38%) Gaps:107/510 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 GQTLNDIYSL------WHHKFRRIPDLVVWPRCHDEVVQLVRLANKHNVMLVPFGGGTSVSGAIT 199
            |:|:.|...|      |....:...|:::.|:..:.|.|::|..|:.|:.:.|.||.|.:.|...
Zfish    87 GRTITDPDLLKSSNVDWLKTVQGSSDVLLRPKTTEGVSQILRYCNERNLAVCPQGGNTGLVGGSV 151

  Fly   200 CPQNESRMICALDTSQMNRLL-WLNRENLTVCFESGIVGQDLERVLRSEGLTVGHEPDSYEFSTL 263
            ...:|    ..|.||.||::. :.|...:..| ::|.|.::|...|......:..:..:.....:
Zfish   152 PVFDE----IILSTSLMNQVFAFDNISGILTC-QAGCVLENLSHYLEERDFIMPLDLGAKGSCHI 211

  Fly   264 GGWVATRASGMKKNVYGNIEDLVVRVRMVTPSG-------TLERECSAPRVSCGPDFNHVILGSE 321
            ||.|:|.|.|::...||::...|:.:.:|...|       ||.::      :.|.|...:.:|||
Zfish   212 GGNVSTNAGGLRLLRYGSLRGTVLGLEVVLADGHVLNCLATLRKD------NTGYDLKQLFIGSE 270

  Fly   322 GTLGVITEVVLKVRPLPSLRRYGSLAFPNFEQGVLFMREVARRRCQPASVRLMDNEQF---MFGQ 383
            |||||||.|.:.....|.......|...:|:|                   |::..|.   |.|:
Zfish   271 GTLGVITAVSILCPRKPKAVNVAFLGCSSFQQ-------------------LLETFQCCRGMLGE 316

  Fly   384 ALKPEKSWWASVVDAMKQRYVTSWKGIDLNQI--CAATLLFEGDLKDVQRQEALIYEIAEKFQGF 446
            .|...:...||.::.:::....:      |.|  |...::.|....:....|..:::..|:    
Zfish   317 ILSAFEFLDASCMNLLEKHLKLT------NPITECPFYIVIETAGSNATHDEEKLHQFLEE---- 371

  Fly   447 PAGGQNGERGYILTFVIAYIRDFGLHQGIVA-ESFETSVPWDRCSLLCRSVKQRVVSECSKRSIN 510
                       ::|..:       :..|.|| |:.:....|        |:::||....:.....
Zfish   372 -----------VMTSSL-------VTDGTVATEATKIKALW--------SLRERVTEALTHEGYT 410

  Fly   511 Y-YTISCRVTQTYDAGACIYFYFG------------------FRSTDVADPVELFEAIEHSARDE 556
            | |.||..|.:.||....:..:.|                  ...|..:...:|..|||....:.
Zfish   411 YKYDISLPVEKIYDLVQDMRRHLGGMAKNVVGYGHVGDGNLHLNITSPSKDFDLLAAIEPYVYEW 475

  Fly   557 ILSCGGSLSHHHGVG-KIRSHWYRNAVTETGSSLYSAAKRHLDPKNIFALGNLLP 610
            .....||:|..||:| |.|::.|.:..:| ..:|..:.|..||||.|......||
Zfish   476 TSQWKGSISAEHGLGLKKRNYIYYSKPSE-AVALMGSIKAMLDPKGILNPYKTLP 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ADPSNP_001188935.1 GlcD 152..612 CDD:223354 108/493 (22%)
FAD_binding_4 159..300 CDD:279851 37/148 (25%)
FAD-oxidase_C 337..608 CDD:280983 56/296 (19%)
d2hgdhNP_001074066.1 GlcD 81..529 CDD:223354 111/508 (22%)
FAD_binding_4 112..249 CDD:279851 35/141 (25%)
FAD-oxidase_C 286..526 CDD:280983 56/295 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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