DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agps and Ldhd

DIOPT Version :10

Sequence 1:NP_611006.1 Gene:Agps / 36669 FlyBaseID:FBgn0033983 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_081846.3 Gene:Ldhd / 52815 MGIID:106428 Length:484 Species:Mus musculus


Alignment Length:478 Identity:115/478 - (24%)
Similarity:185/478 - (38%) Gaps:86/478 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 PDLVVWPRCHDEVVQLVRLANKHNVMLVPFGGGTSVSGAITCPQNESRMICALDTSQMNRLLWLN 223
            ||.||||:..|:|.::..|.....|.::|||.||.|.|.:...|..   :| ::.:.|:::..||
Mouse    66 PDAVVWPQNVDQVSRVASLCYNQGVPIIPFGTGTGVEGGVCAVQGG---VC-INLTHMDQITELN 126

  Fly   224 RENLTVCFESGIVGQDLERVLRSEGLTVGHEPDSYEFSTLGGWVATRASGMKKNVYGNIEDLVVR 288
            .|:.:|..|.|:..:.|...||..||....:|.:  .::|.|..||.|||.....||.:.|.|:.
Mouse   127 TEDFSVVVEPGVTRKALNTHLRDSGLWFPVDPGA--DASLCGMAATGASGTNAVRYGTMRDNVIN 189

  Fly   289 VRMVTPSGTLERECSAPR----VSCGPDFNHVILGSEGTLGVITEVVLKVRPLPSLRRYGSLAFP 349
            :.:|.|.|.|.......|    .:.|.:...:.:|||||||:||...|::.|.|......:.|||
Mouse   190 LEVVLPDGRLLHTAGRGRHYRKSAAGYNLTGLFVGSEGTLGIITSTTLRLHPAPEATVAATCAFP 254

  Fly   350 NFEQGVLFMREVARRRCQPASVRLMDNEQFMFGQALKPEKSWWASVVDAMKQRYVTSWKGIDLNQ 414
            :.:..|....::.:.....|.:..:|:                 .::||..:.       ..||.
Mouse   255 SVQAAVDSTVQILQAAVPVARIEFLDD-----------------VMMDACNRH-------SKLNC 295

  Fly   415 ICAATLL--FEGD----LKDVQRQEALIYE----------IAEKFQGFPAGGQNGERGYILTFVI 463
            ..|.||.  |.|.    .:.:||.||:..:          .|||.....|...|           
Mouse   296 PVAPTLFLEFHGSQQTLAEQLQRTEAITQDNGGSHFSWAKEAEKRNELWAARHN----------- 349

  Fly   464 AYIRDFGLHQGIVAESFETSVPWDRCSLLCRSVKQRVVSECSKRSI-------NYYTISCRVTQT 521
            |:.....|..|..|.|.:..||..|...:....|:.:.:.....:|       |::         
Mouse   350 AWYAALALSPGSKAYSTDVCVPISRLPEILVETKEEIKASKLTGAIVGHVGDGNFH--------- 405

  Fly   522 YDAGACIYFYFGFRSTDVADPVELFEAIEHSARDEILSCGGSLSHHHGVGKIRSHWYRNAVTETG 586
                 ||...    ..|.|:.....:|...:.....|:.||:.:..||:|..:....:..|...|
Mouse   406 -----CILLV----DPDDAEEQRRVKAFAENLGRRALALGGTCTGEHGIGLGKRQLLQEEVGPVG 461

  Fly   587 SSLYSAAKRHLDPKNIFALGNLL 609
            .......|..|||:.:...|.:|
Mouse   462 VETMRQLKNTLDPRGLMNPGKVL 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AgpsNP_611006.1 GlcD 155..610 CDD:440046 115/478 (24%)
LdhdNP_081846.3 GlcD 27..484 CDD:440046 114/476 (24%)

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