DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ADPS and ldhd

DIOPT Version :9

Sequence 1:NP_001188935.1 Gene:ADPS / 36669 FlyBaseID:FBgn0033983 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_956167.1 Gene:ldhd / 334208 ZFINID:ZDB-GENE-030131-6140 Length:497 Species:Danio rerio


Alignment Length:495 Identity:108/495 - (21%)
Similarity:191/495 - (38%) Gaps:108/495 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 RIPDLVVWPRCHDEVVQLVRLANKHNVMLVPFGGGTSVSGAITCPQNESRMICALDTSQMNRLLW 221
            |.||:||:||..:||..|.::.:.:.:.::|||.||.:.|.::..|..   :| ....:|.:::.
Zfish    68 RPPDVVVFPRSVEEVSALAKICHHYRLPIIPFGTGTGLEGGVSALQGG---VC-FSLRKMEQVVD 128

  Fly   222 LNRENLTVCFESGIVGQDLERVLRSEGLTVGHEPDSYEFSTLGGWVATRASGMKKNVYGNIEDLV 286
            |::|:..|..|.|:..:.|...||..||....:|.:  .::|.|..||.|||.....||.:.:.|
Zfish   129 LHQEDFDVTVEPGVTRKSLNSYLRDTGLWFPVDPGA--DASLCGMAATSASGTNAVRYGTMRENV 191

  Fly   287 VRVRMVTPSGTLERECSAPR----VSCGPDFNHVILGSEGTLGVITEVVLKVRPLPSLRRYGSLA 347
            :.:.:|...||:.......|    .:.|.:..::.:|||||||:||:..|::..:|........:
Zfish   192 LNLEVVLADGTILHTAGKGRRPRKTAAGYNLTNLFVGSEGTLGIITKATLRLYGVPESMVSAVCS 256

  Fly   348 FPNFEQGVLFMREVARRRCQPASVRLMDNEQFMFGQALKPEKSWWASVVDAMKQRYVTSWKGIDL 412
            ||:.:..|....::.:.....|.:..:|:                 .:::|..:          .
Zfish   257 FPSVQSAVDSTVQILQAGVPIARIEFLDD-----------------VMINACNR----------F 294

  Fly   413 NQICAAT-----LLFEGDLKDVQRQEALIYEIAEKFQGFPAGGQNGERGYILTFVIAYIRD---- 468
            |.:..|.     |.|.|..|.::.|.::..||..         .||...:      |:..|    
Zfish   295 NNLSYAVTPTLFLEFHGSSKSMEEQVSVTEEITR---------DNGGSDF------AWAEDEETR 344

  Fly   469 --------------FGLHQGIVAESFETSVPWDRCSLLCRSVKQRVVSECSKRSI-------NYY 512
                          ..|..|..|.|.:..||..|...:....|..::|......|       |::
Zfish   345 SRLWKARHDAWYAAMALRPGCKAYSTDVCVPISRLPQIIVETKADLISNNITGPIAGHVGDGNFH 409

  Fly   513 TISCRVTQTYDAGACIYFYFGFRSTDVADPVELFEAIEHSARDEI----LSCGGSLSHHHGVGKI 573
               |.:.                 .|..||.|:...  ||..:.:    |:..|:.:..||:|..
Zfish   410 ---CLIV-----------------LDPNDPDEVQRV--HSFTERLARRALAMDGTCTGEHGIGLG 452

  Fly   574 RSHWYRNAVTETGSSLYSAAKRHLDPKNIFALGNLLPLEE 613
            :....|..:......:....|..|||:|:...|.||.|.:
Zfish   453 KRALLREELGPLAIEVMKGLKASLDPRNLMNPGKLLELTQ 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ADPSNP_001188935.1 GlcD 152..612 CDD:223354 107/492 (22%)
FAD_binding_4 159..300 CDD:279851 42/140 (30%)
FAD-oxidase_C 337..608 CDD:280983 50/304 (16%)
ldhdNP_956167.1 GlcD 38..488 CDD:223354 105/489 (21%)
FAD_binding_4 70..206 CDD:279851 42/141 (30%)
FAD-oxidase_C 247..487 CDD:280983 50/303 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824020at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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