DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ADPS and D2hgdh

DIOPT Version :9

Sequence 1:NP_001188935.1 Gene:ADPS / 36669 FlyBaseID:FBgn0033983 Length:631 Species:Drosophila melanogaster
Sequence 2:XP_006245582.1 Gene:D2hgdh / 301624 RGDID:1307976 Length:553 Species:Rattus norvegicus


Alignment Length:614 Identity:136/614 - (22%)
Similarity:224/614 - (36%) Gaps:128/614 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RLSKRVESVIPKKRHEALKWFGWGYNDSQFYGKDGIICFRGEKYPLGGCELPSFTKWVEKKFDLR 93
            |.|.|.:....::....|||.|               |.|....|| .|...|           :
  Rat    33 RASPRWKKTYSQRASAQLKWLG---------------CPRSVYSPL-ACRAYS-----------K 70

  Fly    94 VDTTKQYPQLPRTYPRPVENAPFLHELKGTTQVDYSAEGIDRLVRC--HGQTLNDIYSL------ 150
            |..:.:....|..|  ||:..||    ...::.|.:|      ..|  .|:.:.|...|      
  Rat    71 VSGSPEVMLTPERY--PVQRLPF----STVSEEDLAA------FECIIPGRVITDPEQLQTCNVD 123

  Fly   151 WHHKFRRIPDLVVWPRCHDEVVQLVRLANKHNVMLVPFGGGTSVSGAITCPQNESRMICALDTSQ 215
            |....|....:::.|:..:||.|::|...|.|:.:.|.||.|.:.|......:|    ..|.|:.
  Rat   124 WLRTVRGCSKVLLRPQTSEEVSQILRHCYKRNLAVNPQGGNTGMVGGSVPVFDE----VILSTAL 184

  Fly   216 MNRLL-WLNRENLTVCFESGIVGQDLERVLRSEGLTVGHEPDSYEFSTLGGWVATRASGMKKNVY 279
            ||::: :.:...:.|| ::|.|.::|.|.::.....:..:..:.....:||.|||.|.|::...|
  Rat   185 MNQVISFHDVSGILVC-QAGCVLEELSRYVQERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRY 248

  Fly   280 GNIEDLVVRVRMVTPSGTLEREC--SAPRVSCGPDFNHVILGSEGTLGVITEVVLKVRPLPSLRR 342
            |::...|:.:.:|...||: ..|  |..:.:.|.|...:.:||||||||||.|.:...|.|....
  Rat   249 GSLRGTVLGLEVVLADGTI-LNCLTSLRKDNTGYDLKQMFIGSEGTLGVITAVSIVCPPRPKAVN 312

  Fly   343 YGSLAFPNFEQGVLFMREVAR--RRCQPASVRLMDNEQFMFGQALKPEKSWWASVVDAMKQRYVT 405
            ...|..|.|       .||.:  |.|:.....::...:||..:.:                    
  Rat   313 VAFLGCPGF-------TEVLQTFRTCKGQLGEILSAFEFMDAECM-------------------- 350

  Fly   406 SWKGIDLNQICAATLLFEGDLKDVQRQEALIYEIAEKFQGFPAGGQNGERGYILTFVIAYIRDFG 470
                    |:....|.....:     ||:..|.:.|     .:|...|.....||.|:..:    
  Rat   351 --------QLVGQHLHLTNPV-----QESPFYVLVE-----TSGSSAGHDAEKLTNVLEQV---- 393

  Fly   471 LHQGIVAESFETSVPWDRCSLLCRSVKQRVVSECSKRSINY-YTISCRVTQTYDAGACIYFYFGF 534
            |:.|:|.:.  |.....|...:..::::|:....|:....: |.:|..|.:.||....:....|.
  Rat   394 LNSGLVIDG--TMATDQRKVQMLWALRERITEALSRDGYVFKYDLSLPVERLYDLVIDLRTRLGP 456

  Fly   535 RSTDV------------------ADPVELFEAIEHSARDEILSCGGSLSHHHGVGKIRSHWYRNA 581
            |:..|                  |...||..|:|...........||:|..||:|..:.:....:
  Rat   457 RAKHVVGYGHLGDGNLHLNVTAEAFSQELLGALEPYVYAWTAEQRGSVSAEHGLGFKKKNVLGYS 521

  Fly   582 VTETGSSLYSAAKRHLDPKNIFALGNLLP 610
            .......|....|..||||.|......||
  Rat   522 KPPVAVKLMQQLKAMLDPKGILNPYKTLP 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ADPSNP_001188935.1 GlcD 152..612 CDD:223354 109/483 (23%)
FAD_binding_4 159..300 CDD:279851 36/141 (26%)
FAD-oxidase_C 337..608 CDD:280983 54/291 (19%)
D2hgdhXP_006245582.1 GlcD 108..550 CDD:223354 111/498 (22%)
FAD_binding_4 133..270 CDD:279851 36/142 (25%)
FAD-oxidase_C 307..547 CDD:280983 54/290 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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