DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ADPS and LDHD

DIOPT Version :9

Sequence 1:NP_001188935.1 Gene:ADPS / 36669 FlyBaseID:FBgn0033983 Length:631 Species:Drosophila melanogaster
Sequence 2:XP_024305942.1 Gene:LDHD / 197257 HGNCID:19708 Length:567 Species:Homo sapiens


Alignment Length:503 Identity:108/503 - (21%)
Similarity:169/503 - (33%) Gaps:144/503 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 SGAITCPQNESRMICALDTSQMNRLLWLNRENLTVCFESGIVGQDLERVLRSEGLTVGHEPDSYE 259
            ||..|||....  :| ::.:.|:|:|.||:|:.:|..|.|:..:.|...||..||....:|.:  
Human   121 SGLSTCPNQGG--VC-VNLTHMDRILELNQEDFSVVVEPGVTRKALNAHLRDSGLWFPVDPGA-- 180

  Fly   260 FSTLGGWVATRASGMKKNVYGNIEDLVVRVRMVTPSGTLERECS--------------------A 304
            .::|.|..||.|||.....||.:.|.|:.:.:|.|.|.|.....                    :
Human   181 DASLCGMAATGASGTNAVRYGTMRDNVLNLEVVLPDGRLLHTAGRGRHFRFGFWPEIPHHTAWYS 245

  Fly   305 PRVS-------CGPDFNHVILGSEGTLGVITEVVLKVRPLPSLRRYGSLAFPNFEQGVLFMREVA 362
            |.||       .|.:...:.:|||||||:||...|::.|.|......:.|||:.:..|.....:.
Human   246 PCVSLGRRKSAAGYNLTGLFVGSEGTLGLITATTLRLHPAPEATVAATCAFPSVQAAVDSTVHIL 310

  Fly   363 RRRCQPASVRLMDNEQFMFGQALKPEKSWWASVVDAMKQRYVTSWKGIDLNQICAATLL--FEGD 425
            :.....|.:..:|.                 .::||. .||      ..||.:.|.||.  |.|.
Human   311 QAAVPVARIEFLDE-----------------VMMDAC-NRY------SKLNCLVAPTLFLEFHGS 351

  Fly   426 LKDVQRQEALIYEIAEKFQGFPAGGQNG-----------ERGYILTF-VIAYIRDFGLHQGIVAE 478
            .:.::.|.....||.:         |||           ||..:.|. ..|:........|....
Human   352 QQALEEQLQRTEEIVQ---------QNGASDFSWAKEAEERSRLWTARHNAWYAALATRPGCKGY 407

  Fly   479 SFETSVPWDRCSLLCRSVKQR----------------------------------------VVSE 503
            |.:..||..|...:....|:.                                        |:|.
Human   408 STDVCVPISRLPEIVVQTKEDLNASGLTGSAHPAAGERWGGVRADQSLGQQEARGGLGWRIVLSS 472

  Fly   504 CSKRSI-------NYYTISCRVTQTYDAGACIYFYFGFRSTDVADPVELFEAIEHSARDEILSCG 561
            ....||       |::              ||...    :.|.|:.:...:|.........|:..
Human   473 GPPGSIVGHVGDGNFH--------------CILLV----NPDDAEELGRVKAFAEQLGRRALALH 519

  Fly   562 GSLSHHHGVGKIRSHWYRNAVTETGSSLYSAAKRHLDPKNIFALGNLL 609
            |:.:..||:|..:....:..|...|.......|..|||:.:...|.:|
Human   520 GTCTGEHGIGMGKRQLLQEEVGAVGVETMRQLKAVLDPQGLMNPGKVL 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ADPSNP_001188935.1 GlcD 152..612 CDD:223354 108/503 (21%)
FAD_binding_4 159..300 CDD:279851 36/104 (35%)
FAD-oxidase_C 337..608 CDD:280983 56/331 (17%)
LDHDXP_024305942.1 FAD-oxidase_C <125..567 CDD:332893 105/497 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824020at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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