DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a8 and Cyp4f1

DIOPT Version :10

Sequence 1:NP_523749.2 Gene:Cyp6a8 / 36666 FlyBaseID:FBgn0013772 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_062569.2 Gene:Cyp4f1 / 56266 RGDID:70926 Length:524 Species:Rattus norvegicus


Alignment Length:545 Identity:139/545 - (25%)
Similarity:235/545 - (43%) Gaps:92/545 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TYILFQVAVALLAILT--YYIHRKLTYFKR-RGIP-------------FVAPHLIRGNMEELQKT 52
            |.:||..:..|..|||  |..:|.   |:| ||.|             .|.|  ....::||.:.
  Rat    21 TLLLFGASWILAQILTQIYAAYRN---FRRLRGFPQPPKRNWLMGHVGMVTP--TEQGLKELTRL 80

  Fly    53 KNIHEIFQDHYNKFRESKAPFVGFFFFQSPAAFVIDL---ELAKQIL-------IKDFSNFSNKG 107
            ...:.                .||..:..|...||.|   ::.:.||       :||.       
  Rat    81 VGTYP----------------QGFLMWIGPMVPVITLCHSDIVRSILNASAAVALKDV------- 122

  Fly   108 IFYNEKDDPISAHLFNLDGAQWRLLRNKLSSTFTSGKMKLMYPTVVSVANEFMTVMHEKVPK--- 169
            |||......:...|....|.:|...|..|:..|....:|    ..|.:.|:...:||.|..:   
  Rat   123 IFYTILKPWLGDGLLVSAGDKWSRHRRMLTPAFHFNILK----PYVKIFNDSTNIMHAKWKRLIS 183

  Fly   170 --NSVLEIRDLVARFTVDVIGTCAFGIQCNSLRDEKAEFL--YFGKRSLVDKRHGTLLNGFMRSY 230
              :|.|::.:.|:..|:|.:..|.|....| .:::.:|::  .....:||.|||...|......|
  Rat   184 EGSSRLDMFEHVSLMTLDSLQKCVFSFDSN-CQEKSSEYIAAILELSALVAKRHQQPLLFMDLLY 247

  Fly   231 PKLARKLGMVRTAPHIQEFYSRIVTE---TVA-------VREKEHIKRNDFMDMLIELKNQKEMT 285
            ......:...:....:.||...::.|   |:.       ::.|...|..||:|:|:..|:     
  Rat   248 NLTPDGMRFHKACNLVHEFTDAVIRERRRTLPDQGLDEFLKSKAKSKTLDFIDVLLLTKD----- 307

  Fly   286 LENGDVVRGLTMEEVLAQAFVFFIAGFETSSSTMGFALYELAKNPDIQDKVRAEVEEVIEQHD-Q 349
             |:|   :.|:.|::.|:|..|...|.:|::|.:.:.||.|||:|:.|::.|.||:|::...| :
  Rat   308 -EDG---KELSDEDIRAEADTFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQELLRDRDPE 368

  Fly   350 NFTYECTKDLKYLNQVLDETLRLYTIVPNLDRMAAKRYVVPGHPNFVIEAGQSVIIPSSAIHHDP 414
            ...::....|.:|...:.|:|||:..|..:.|...:..::|  ....|..|...:|....|||:|
  Rat   369 EIEWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDILLP--DGRTIPKGIICLISIFGIHHNP 431

  Fly   415 SIYPEPFEFRPERFSPEESAGRPSVAWLPFGDGPRNCIGLRFGQMQARIGLALLIRNFKFSTCSK 479
            |::|:|..:.|.||.||.......:|::||..|||||||..|...:.::.|||.:..|:.....|
  Rat   432 SVWPDPEVYNPFRFDPENIKDSSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRLLPDDK 496

  Fly   480 TPNPLVYDPKSFVLGVKDGIYLKVE 504
            .|.   ..|: .:|..:.|::|:||
  Rat   497 EPR---RQPE-LILRAEGGLWLRVE 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a8NP_523749.2 CYP6-like 70..500 CDD:410679 118/457 (26%)
Cyp4f1NP_062569.2 CYP4F 74..515 CDD:410772 120/483 (25%)

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