DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6a8 and Cyp4d1

DIOPT Version :9

Sequence 1:NP_523749.2 Gene:Cyp6a8 / 36666 FlyBaseID:FBgn0013772 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster


Alignment Length:570 Identity:137/570 - (24%)
Similarity:233/570 - (40%) Gaps:136/570 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFQVAVALLA------ILTYYIHRKLTYFKR------------------RGIPFVA--PHLIRGN 45
            :|.|..|:||      :|.|::.     |||                  .|..|:.  ||     
  Fly     1 MFLVIGAILASALFVGLLLYHLK-----FKRLIDLISYMPGPPVLPLVGHGHHFIGKPPH----- 55

  Fly    46 MEELQKTKNIHEIFQDHYNKFRESKAPFVGFFFFQSPAAFVI-----DLELAKQILIKDFSNFSN 105
                :..|.|.| |.:.|:|.:..|.       :..|...|:     |:|:....|     .|::
  Fly    56 ----EMVKKIFE-FMETYSKDQVLKV-------WLGPELNVLMGNPKDVEVVLGTL-----RFND 103

  Fly   106 KGIFYNEKDDPISAHLFNLDGAQWRLLRNKLSSTFTSGKMKLMYPTVVSVANEFMTVMHEKVPK- 169
            |...|...:..:...|....|.:|...|..::..|.           ..:.::|:.|. ||..: 
  Fly   104 KAGEYKALEPWLKEGLLVSRGRKWHKRRKIITPAFH-----------FKILDQFVEVF-EKGSRD 156

  Fly   170 -------------NSVLEIRDLVARFTVDVIGTCAFGIQCNSLRDEKAEFLYFGK--RSLVDKRH 219
                         :|...:.|.:...|:|.|...|.|:..|:..:..:|::...|  ..::.||.
  Fly   157 LLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRM 221

  Fly   220 GTLLNGFMRSY--PKLARKLGMVRTAPHIQEFYSRIVTETVAVREKEHIKR--------ND---- 270
            ..:|..|..:|  ..|||.........|  :|     ||.:.|:.:|.:.|        ||    
  Fly   222 FNILYRFDLTYMLTPLARAEKKALNVLH--QF-----TEKIIVQRREELIREGSSQESSNDDADV 279

  Fly   271 -------FMDMLIELKNQKEMTLENGDVVRGLTMEEVLAQAFVFFIAGFETSSSTMGFALYELAK 328
                   |:|:|:: ....|..|.|.|:     .|||  ..|:|  .|.:|:||.:.|..|.:|.
  Fly   280 GAKRKMAFLDILLQ-STVDERPLSNLDI-----REEV--DTFMF--EGHDTTSSALMFFFYNIAT 334

  Fly   329 NPDIQDKVRAEVEEVIEQHDQN--FTYECTKDLKYLNQVLDETLRLYTIVPNLDRMAAKRYVVPG 391
            :|:.|.|...|:..|: .:|::  .:||....|.|::..:.||||:|..||.|.|...:...:.|
  Fly   335 HPEAQKKCFEEIRSVV-GNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEING 398

  Fly   392 HPNFVIEAGQSVIIPSSAIHHDPSIYPEPFEFRPERFSPEESAGRPS-VAWLPFGDGPRNCIGLR 455
            .   :|.||.::.|....:.....::.||..|:||||....:|.:.: .|::||..|||||||.:
  Fly   399 K---LIPAGTNIGISPLYLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQK 460

  Fly   456 FGQMQARIGLALLIRNFK--FSTCSKTPNPLVYDPKSFVLGVKDGIYLKV 503
            |..::.:..:|.::|:::  |...|..|..|:.:   .:|..|:.:..||
  Fly   461 FAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAE---LILRTKEPLMFKV 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a8NP_523749.2 p450 39..503 CDD:278495 123/510 (24%)
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 125/529 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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