DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a8 and Cyp26c1

DIOPT Version :10

Sequence 1:NP_523749.2 Gene:Cyp6a8 / 36666 FlyBaseID:FBgn0013772 Length:506 Species:Drosophila melanogaster
Sequence 2:XP_217935.3 Gene:Cyp26c1 / 308190 RGDID:1308843 Length:518 Species:Rattus norvegicus


Alignment Length:292 Identity:68/292 - (23%)
Similarity:116/292 - (39%) Gaps:66/292 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 VREKEHIKRNDFMDMLIELKNQKEMTLENGDVV-----------RGLTMEEVLAQAFVFFIAGFE 313
            :|.::.:.::  :|.:|..|.::|:|.|.||.:           |.|:::|:...|.....|.|.
  Rat   237 IRARDQLYQH--LDEVIAEKLREELTAEPGDALHLIINSARELGRELSVQELKELAVELLFAAFF 299

  Fly   314 TSSSTMGFALYELAKNPDIQDKVRAEVEEVIEQHDQNFTYECT---------------------- 356
            |::|.....:..|.::|....|::.|:..      |.....|:                      
  Rat   300 TTASASTSLILLLLQHPAAIAKIQQELSA------QGLGSPCSCAPRASGSRPDCSCEPDLSLAV 358

  Fly   357 -KDLKYLNQVLDETLRLYTIVPNLDRMAAKRYVVPGHPNFVIEAGQSVIIPSSAIHHDPSIYPEP 420
             ..|:|::.|:.|.|||...|....|.|.:.:.:.|   :.|..|.||:......|...::|..|
  Rat   359 LGRLRYVDCVVKEVLRLLPPVSGGYRTALRTFELDG---YQIPKGWSVMYSIRDTHETAAVYRSP 420

  Fly   421 FE-FRPERFSPEESAGRPS---VAWLPFGDGPRNCIGLRFGQMQARIGLALLIRNFKFSTCSKTP 481
            .| |.||||..|....|.|   ..::|||.|.|:|:|....|...::....|:|..::...  ||
  Rat   421 PEGFDPERFGVESEDARGSGGRFHYIPFGGGARSCLGQELAQAVLQLLAVELVRTARWELA--TP 483

  Fly   482 N-------PLVYDPKSFV--------LGVKDG 498
            .       |:|:.....:        ||..||
  Rat   484 AFPVMQTVPIVHPVDGLLLLFHPLPTLGAGDG 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a8NP_523749.2 CYP6-like 70..500 CDD:410679 68/292 (23%)
Cyp26c1XP_217935.3 cytochrome_P450 59..504 CDD:477761 64/279 (23%)

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