DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a20 and cyp26b1

DIOPT Version :10

Sequence 1:NP_611002.3 Gene:Cyp6a20 / 36664 FlyBaseID:FBgn0033980 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001072655.1 Gene:cyp26b1 / 780112 XenbaseID:XB-GENE-991500 Length:511 Species:Xenopus tropicalis


Alignment Length:521 Identity:114/521 - (21%)
Similarity:204/521 - (39%) Gaps:84/521 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVMIVLLIGVITFVAWYVHQHFNYWKRR-GIPHDEP---KIPYGNTSELM--KTVHFADIFKRT 59
            :|.:...|:.|...:|  |.|..  |:.| ....|:.   .||.|:....:  :|.|:. :....
 Frog    12 LATLAACLVSVALLLA--VSQQL--WQLRWAATRDKSCKLPIPKGSMGFPLVGETFHWI-LQGSD 71

  Fly    60 YNKLRNKTDGPFVGFYMYFKRMVVVTDIDFAKTVLIREFDKFHDRGVFHN--ERDDPLSA----- 117
            :...|.:..|.....::..:.::.||..:..:.:|:.|          |:  ..:.|.|.     
 Frog    72 FQSSRREKYGNVFKTHLLGRPLIRVTGAENVRKILMGE----------HHLVSTEWPRSTRMLLG 126

  Fly   118 --NLVNIDGQKWKTLRQKLTPTFTSGKMKTMFPTILTVGDELIRVFGETASADSDSMEITNVVAR 180
              :|.|..|...:..|:..:..|:...:::..|.|..|..:.:||:.....:.:...|...:..|
 Frog   127 PNSLANSIGDIHRHKRKVFSKIFSHEALESYLPKIQLVIQDTLRVWSSNPESINVYCEAQKLTFR 191

  Fly   181 FTADVIGSCAFGLDCHSLSDPKAKFVQMGTTAITERRHGKSMDLLLFG------APELAAKLRMK 239
            ....|:  ..|.|....||.....|.|     ..|......:|:...|      |.|:..|...|
 Frog   192 MAIRVL--LGFRLSDEELSQLFQVFQQ-----FVENVFSLPVDVPFSGYRRGIRAREMLLKSLEK 249

  Fly   240 ATVQEVEDFYMNIIRDTVDYRVKNNVKRHDFVDMLIEMKLKFDNGDKENG--LTFNEIAAQAFIF 302
            |..:::::      ....||.        |.:|:|||       ..||:|  ||..|:.......
 Frog   250 AIQEKLQN------TQGKDYA--------DALDILIE-------SGKEHGKELTMQELKDGTLEL 293

  Fly   303 FLAGFETSSTTMGFALYELACHQDIQDKLRTEI--NTVLKQHN-----GKLDYDSMREMTYLEKV 360
            ..|.:.|:::.....:.:|..|..:.:|||.|:  |::|  ||     |.|..:::..:.||:.|
 Frog   294 IFAAYATTASASTSLIMQLLKHPSVLEKLREELRGNSIL--HNGCVCEGALRVETISSLHYLDCV 356

  Fly   361 IDETMRKRPVVGHLIRVATQHYQHTNPKYNIEKGTGVIVPTLAIHHDPEFYPEPEKFIPERFDED 425
            |.|.:|....|....|...|.::...  :.|.||..|:......|.....:.:.:.|.|:||.:|
 Frog   357 IKEILRLFSPVSGGYRTVLQTFELDG--FQIPKGWSVLYSIRDTHDTAPVFKDVDVFDPDRFGQD 419

  Fly   426 QVQQRPA-CTFLPFGDGPRNCIGLRFGRMQVIVGMALLIHNFKFEFHPTKTV-----VPLEYRTD 484
            :.:.:.. ..:||||.|.|||:|....::.:.|....|....:||. .|:|.     ||:.:..|
 Frog   420 RTEDKDGRFHYLPFGGGVRNCLGKHLAKLFLKVLAIELASMSRFEL-ATRTFPKIMPVPVVHPAD 483

  Fly   485 D 485
            :
 Frog   484 E 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a20NP_611002.3 CYP6-like 67..495 CDD:410679 99/449 (22%)
cyp26b1NP_001072655.1 CYP26B1 60..489 CDD:410730 102/469 (22%)

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