DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a20 and Cyp4f1

DIOPT Version :10

Sequence 1:NP_611002.3 Gene:Cyp6a20 / 36664 FlyBaseID:FBgn0033980 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_062569.2 Gene:Cyp4f1 / 56266 RGDID:70926 Length:524 Species:Rattus norvegicus


Alignment Length:530 Identity:132/530 - (24%)
Similarity:232/530 - (43%) Gaps:72/530 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLLIGVITFVAWYVHQHF----NYWKRRGIPHDEPKIPYGNTSELMKTVHFADIFKRTYNKLRNK 66
            :||.|....:|..:.|.:    |:.:.||.| ..||     .:.||..|......::...:|...
  Rat    22 LLLFGASWILAQILTQIYAAYRNFRRLRGFP-QPPK-----RNWLMGHVGMVTPTEQGLKELTRL 80

  Fly    67 TDGPFVGFYMYFKRMVVVTDI---DFAKTVLIREFDKFHDRGVFHNERDDPLSANLVNIDGQKWK 128
            ......||.|:...||.|..:   |..:::|...........:|:......|...|:...|.||.
  Rat    81 VGTYPQGFLMWIGPMVPVITLCHSDIVRSILNASAAVALKDVIFYTILKPWLGDGLLVSAGDKWS 145

  Fly   129 TLRQKLTPTFTSGKMKTMFPTILTVGDELIRVFGETA-----------SADSDSMEITNVVARFT 182
            ..|:.|||.|....:|           ..:::|.::.           |..|..:::...|:..|
  Rat   146 RHRRMLTPAFHFNILK-----------PYVKIFNDSTNIMHAKWKRLISEGSSRLDMFEHVSLMT 199

  Fly   183 ADVIGSCAFGLD--CHSLSDPKAKFVQMGTTAITERRHGKS---MDLLLFGAPELAAKLRMKATV 242
            .|.:..|.|..|  |...|......: :..:|:..:||.:.   ||||....|:   .:|.....
  Rat   200 LDSLQKCVFSFDSNCQEKSSEYIAAI-LELSALVAKRHQQPLLFMDLLYNLTPD---GMRFHKAC 260

  Fly   243 QEVEDFYMNIIRDT--------VDYRVKNNVKRH--DFVDMLIEMKLKFDNGDKENGLTFNEIAA 297
            ..|.:|...:||:.        :|..:|:..|..  ||:|:|:..|   |...||  |:..:|.|
  Rat   261 NLVHEFTDAVIRERRRTLPDQGLDEFLKSKAKSKTLDFIDVLLLTK---DEDGKE--LSDEDIRA 320

  Fly   298 QAFIFFLAGFETSSTTMGFALYELACHQDIQDKLRTEINTVLKQHN-GKLDYDSMREMTYLEKVI 361
            :|..|...|.:|:::.:.:.||.||.|.:.|::.|.|:..:|:..: .::::|.:.::.:|...|
  Rat   321 EADTFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQELLRDRDPEEIEWDDLAQLPFLTMCI 385

  Fly   362 DETMRKRPVVGHLIRVATQHYQHTNPKYNIEKGTGVIVPTLAIHHDPEFYPEPEKFIPERFDEDQ 426
            .|::|..|.|..:.|..||.....:.: .|.||...::....|||:|..:|:||.:.|.|||.:.
  Rat   386 KESLRLHPPVTVISRCCTQDILLPDGR-TIPKGIICLISIFGIHHNPSVWPDPEVYNPFRFDPEN 449

  Fly   427 VQQRPACTFLPFGDGPRNCIGLRFGRMQVIVGMALLIHNFKFEFHPTKTVVPLE---YRTDDFLL 488
            ::......|:||..|||||||..|...::.|.:||.:..|:        ::|.:   .|..:.:|
  Rat   450 IKDSSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFR--------LLPDDKEPRRQPELIL 506

  Fly   489 SSKGGIHLKV 498
            .::||:.|:|
  Rat   507 RAEGGLWLRV 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a20NP_611002.3 CYP6-like 67..495 CDD:410679 115/460 (25%)
Cyp4f1NP_062569.2 CYP4F 74..515 CDD:410772 116/469 (25%)

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