DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a20 and Cyp4f4

DIOPT Version :10

Sequence 1:NP_611002.3 Gene:Cyp6a20 / 36664 FlyBaseID:FBgn0033980 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_775146.1 Gene:Cyp4f4 / 286904 RGDID:708363 Length:522 Species:Rattus norvegicus


Alignment Length:551 Identity:131/551 - (23%)
Similarity:236/551 - (42%) Gaps:110/551 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MIVLLIGVI---------TFVAWYVHQHFNYWKRRGIPHDEPKIPYGN-----------TSELMK 48
            :::||||..         |::.:..:||.         .|.|:.|..|           |.:.:|
  Rat    20 LLLLLIGASWLLVRVLTQTYIFYRTYQHL---------CDFPQPPKWNWFLGHLGMITPTEQGLK 75

  Fly    49 TVHFADIFKRTYNKLRNKTDGPFVGFYMYFKRMVVVTDIDFAKTVLIREFDKFHDRGVFHNERDD 113
            .|   .....||.:......||.:.........|:.:.:..:.:|.::|.       :|::....
  Rat    76 QV---TKLVATYPQGFMTWLGPILPIITLCHPDVIRSVLSASASVALKEV-------IFYSFLKP 130

  Fly   114 PLSANLVNIDGQKWKTLRQKLTPTFTSGKMKTMFPTILTVGDELIRVFGET-----------ASA 167
            .|...|:..||.||...|:.|||.|....:|           ..:::|.::           ||.
  Rat   131 WLGDGLLLSDGDKWSCHRRMLTPAFHFNILK-----------PYVKIFNDSTNIMHAKWQDLASG 184

  Fly   168 DSDSMEITNVVARFTADVIGSCAFGLDCHSLSDPKAKFVQ--MGTTAITERR------HGKSMDL 224
            .|..:::...::..|.|.:..|.|..|.:....| ::::.  :..:|:..:|      |..|:..
  Rat   185 GSARLDMFKNISLMTLDSLQKCVFSFDSNCQEKP-SEYISAILELSALVAKRYQQLLLHTDSLYQ 248

  Fly   225 LLFGAPEL--AAKL-----------RMKATVQEVEDFYMNIIRDTVDYRVKNNVKRHDFVDMLIE 276
            |.......  |.||           |.:|...:.||..:         :.|...|..||:|:|:.
  Rat   249 LTHNGRRFHKACKLVHNFTDAVIQGRRRALPSQHEDDIL---------KAKARSKTLDFIDVLLL 304

  Fly   277 MKLKFDNGDKENGLTFNEIAAQAFIFFLAGFETSSTTMGFALYELACHQDIQDKLRTEINTVLK- 340
            .|   |...||  |:..:|.|:|..|...|.:|:::.:.:.||.||.|.:.|::.|.|:..:|: 
  Rat   305 TK---DEDGKE--LSDEDIRAEADTFMFEGHDTTASGLSWILYNLARHPEYQERCRQEVRELLRD 364

  Fly   341 QHNGKLDYDSMREMTYLEKVIDETMRKRPVVGHLIRVATQHYQHTNPKYNIEKGTGVIVPTLAIH 405
            :.:.::::|.:.::.:|...|.|::|..|.|..:.|..||.....:.:. |.||...|:...|.|
  Rat   365 RESTEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRRCTQDIVLPDGRV-IPKGVICIINIFATH 428

  Fly   406 HDPEFYPEPEKFIPERFDEDQVQQRPACTFLPFGDGPRNCIGLRFGRMQVIVGMALLIHNFKFEF 470
            |:|..:|:||.:.|.|||.:.::.|....|:||..|||||||..|...::.|.:||.:..|:   
  Rat   429 HNPTVWPDPEVYDPFRFDPENIKDRSPLAFIPFSAGPRNCIGQTFAMNEMKVALALTLLRFR--- 490

  Fly   471 HPTKTVVPLE---YRTDDFLLSSKGGIHLKV 498
                 |:|.:   .|..:.:|.::||:.|:|
  Rat   491 -----VLPDDKEPRRKPELILRAEGGLWLRV 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a20NP_611002.3 CYP6-like 67..495 CDD:410679 113/463 (24%)
Cyp4f4NP_775146.1 CYP4F 74..515 CDD:410772 117/485 (24%)

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