DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a20 and Cyp26a1

DIOPT Version :10

Sequence 1:NP_611002.3 Gene:Cyp6a20 / 36664 FlyBaseID:FBgn0033980 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_031837.2 Gene:Cyp26a1 / 13082 MGIID:1096359 Length:497 Species:Mus musculus


Alignment Length:252 Identity:60/252 - (23%)
Similarity:111/252 - (44%) Gaps:24/252 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 NIIRDTVDYRVKNNVKR----------HDFVDMLIEMKLKFDNGDKENGLTFNEIAAQAFIFFLA 305
            |:|...::..::..::|          .|.:.:|||.  .::.|::   |....:...:......
Mouse   241 NLIHARIEENIRAKIRRLQATEPDGGCKDALQLLIEH--SWERGER---LDMQALKQSSTELLFG 300

  Fly   306 GFETSSTTMGFALYELACHQDIQDKLRTEINT--VLKQHN--GKLDYDSMREMTYLEKVIDETMR 366
            |.||:::.....:..|..:..:..|:|.||.:  :|.:.|  .|||.:::.::.|...||.||:|
Mouse   301 GHETTASAATSLITYLGLYPHVLQKVREEIKSKGLLCKSNQDNKLDMETLEQLKYTGCVIKETLR 365

  Fly   367 KRPVVGHLIRVATQHYQHTNPKYNIEKGTGVIVPTLAIHHDPEFYPEPEKFIPERFDEDQVQQRP 431
            ..|.|....|||.:.::...  |.|.||..||......|...:.:...|:|.|:||.....:...
Mouse   366 LNPPVPGGFRVALKTFELNG--YQIPKGWNVIYSICDTHDVADIFTNKEEFNPDRFIVPHPEDAS 428

  Fly   432 ACTFLPFGDGPRNCIGLRFGRMQVIVGMALLIHNFKFEF---HPTKTVVPLEYRTDD 485
            ..:|:|||.|.|:|:|..|.::.:.:....|..:..::.   .||....|..|..|:
Mouse   429 RFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLLNGPPTMKTSPTVYPVDN 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a20NP_611002.3 CYP6-like 67..495 CDD:410679 60/252 (24%)
Cyp26a1NP_031837.2 CYP26A1 55..490 CDD:410731 60/252 (24%)

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