DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a9 and Cyp4a3

DIOPT Version :10

Sequence 1:NP_523748.2 Gene:Cyp6a9 / 36663 FlyBaseID:FBgn0013771 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_038965516.1 Gene:Cyp4a3 / 298423 RGDID:631356 Length:511 Species:Rattus norvegicus


Alignment Length:537 Identity:142/537 - (26%)
Similarity:237/537 - (44%) Gaps:89/537 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLAIVVVLVG----YLLLKW-RRALHYWQNLDIPCEEPHILMGSLTGVQTSRSFSAI--WMDYYN 64
            ||::.:||..    ||..:| .:||.     ..|....|.|.|.   ....|.|..:  |::   
  Rat    24 LLSLFLVLFKAVQFYLRRQWLLKALE-----KFPSTPSHWLWGH---DLKDREFQQVLTWVE--- 77

  Fly    65 KFRGTGPFAGFYWF--QRPGILVLDISLAKLILIKEFNKFTDRGFYHNTEDDPLSGQ---LFLLD 124
            ||    |.|...|.  .:..:|:.|....|::|.:...|.:  |.|.......:||.   |.||:
  Rat    78 KF----PGACLQWLSGSKTRVLLYDPDYVKVVLGRSDPKAS--GIYQFLAPWIVSGTGYGLLLLN 136

  Fly   125 GQKWKSMRSKLSYTFTSGKMKYMFPTVVKVGHEFIEVFGQAMEK-----SPIVEVRDILARFTTD 184
            |:||......|:..|..|.:|    ..||:..:.:.:.....||     .|: |:...::..|.|
  Rat   137 GKKWFQHWRMLTPAFHYGILK----PYVKIMADSVSIMLDKWEKLDDQDHPL-EIFHYVSLMTLD 196

  Fly   185 VIGTCAFGIECSSLKDPEAE--------------FRVMGRRAIFEQRHGPIGIAFINSFQNLARR 235
            .:..|||..:.|...|..:.              |||   |:.|   :|...|..::|...|:||
  Rat   197 TVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLTFFRV---RSAF---YGNSIIYNMSSDGRLSRR 255

  Fly   236 L------HMK--ITLEEAEHFFLRIVRETVAFREKNNIRRNDFMDQLIDLKNSPLTKSESGESVN 292
            .      |..  |.:.:|:   |:...|....|:|.::   ||:|.|:      ..|.|.|:|  
  Rat   256 ACQIAHEHTDGVIKMRKAQ---LQNEEELQKARKKRHL---DFLDILL------FAKMEDGKS-- 306

  Fly   293 LTIEEMAAQAFVFFGAGFETSSTTMGFALYELAQHQDIQDRVRKECQEVIGKYNGEITYESMKDM 357
            |:.|::.|:...|...|.:|:::.:.:..|.||.|.:.|:|.|:|.|.::|. ...:|::.:..:
  Rat   307 LSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGD-GTSVTWDHLDQI 370

  Fly   358 VYLDQVISETLRLYTVLPVLNRECLEDYEVPGHPKYVIKKGMPVLIPCGAMHRDEKLYANPNTFN 422
            .|....|.|.||||..:|.::||.......|....  |.||:...|....:|.:...:.||..|:
  Rat   371 SYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRS--IPKGITTTILIYGLHHNPSYWPNPKVFD 433

  Fly   423 PDNFSPERVKERDSVEWLPFGDGPRNCIGMRFGQMQARSGLALLINRFKFSVCEQTTIPIVYSKK 487
            |..|||:  ..|.|..:|||..|.|||||.:|...:.:..:||.:.||:. :.:.|.||:..:: 
  Rat   434 PSRFSPD--SPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFEL-LPDPTRIPVPMAR- 494

  Fly   488 TFLISSETGIFLKVERV 504
             .::.|:.||.|:::::
  Rat   495 -LVLKSKNGIHLRLKKL 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a9NP_523748.2 CYP6-like 68..498 CDD:410679 122/461 (26%)
Cyp4a3XP_038965516.1 CYP4B-like 69..506 CDD:410771 127/478 (27%)

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